Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq70 134 3e-26 seq65 116 9e-21 >seq70 Length=162585 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 |||||| ||||| | |||||||| ||||| || |||||||||||||| | | || | Sbjct 32011 GAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCG 32070 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||||||||| || | ||||||||||| | ||||| || Sbjct 32071 GCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTC 32130 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || |||||| | || | | || || ||| || ||||| || Sbjct 32131 CTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGT 32190 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| |||||||| || ||||||||||||| ||||| Sbjct 32191 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 32229 >seq65 Length=170753 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| |||||||| | || ||||| || |||||||||||||| | | || | Sbjct 103940 GAGGCGGAGAACAAGATGTAACGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCG 103881 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || ||||| || || | ||||||||||| | ||| || || Sbjct 103880 GCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTC 103821 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | | | || || ||| ||||| || || Sbjct 103820 CTTATCTTGGATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGT 103761 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || || ||||||||||| ||||||| ||||| Sbjct 103760 AATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 103722 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||| || ||||||||||| ||| | || |||||||| || | Sbjct 104156 CAAG-TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCCA 104098 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | | ||||||||||| | ||| || ||||| || |||| Sbjct 104097 GCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAA 104038 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | | |||| ||| ||| || || |||||||| || || | Sbjct 104037 TCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTC 103978 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| ||||| | |||||| Sbjct 103977 CAGTCAAGGTCTTGACGAAAATCTGCAT 103950 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || ||||| || || ||||| || || |||||||| || | | || | ||||| Sbjct 103706 GAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATC 103647 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || || ||||| || | ||||||||||| | || || ||||| || Sbjct 103646 CTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTC 103587 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||| || ||||| | || | | | || || || || ||||| ||||| || Sbjct 103586 TTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGT 103527 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| |||||||| || || | |||||| Sbjct 103526 CTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 103494 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | |||||||| ||||| || || || ||||| |||| | ||| | || || Sbjct 103477 AGGACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAGTCGGACAGAGTGCGACCGTCC 103418 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || ||||| || || | ||||||||||| | || || ||||| || Sbjct 103417 TCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 103358 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | |||| || ||| || || | ||| || || Sbjct 103357 TGGATCTTCGACTTCACATTGTCGATAGTGTCGGACGACTCAACCTCCAAAGTGATGGTC 103298 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 103297 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 103266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153812358719141