Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2005NY08_20[genbank_20GCA_5F001662605.1_20201 6-06-24] 571 sequences; 32,206,309 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq65 161 9e-35 seq70 156 4e-33 seq100 118 1e-21 >seq65 Length=170753 Score = 161 bits (178), Expect = 9e-35 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || || || |||||||||||| || |||||||| Sbjct 103492 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAGTCGGAC 103433 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || ||||||||||| ||||| ||||||||||| ||||||| ||| Sbjct 103432 AGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 103373 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| || | | | ||||||| |||||| || Sbjct 103372 ATGCCCTCCTTGTCCTGGATCTTCGACTTC-ACATTGTCGATAGTGTCGGACGACTCAAC 103314 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || || ||||| ||||| |||||||| Sbjct 103313 CTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 103266 Score = 143 bits (158), Expect = 2e-29 Identities = 174/232 (75%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||||||||| || ||||||||||||||| ||||| || Sbjct 103720 CCACCACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 103661 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || |||||||| || || || ||||||||||| ||||||| ||| Sbjct 103660 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 103601 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACA-CA---GTGTCGCTCGACT 41810 | | |||||||| | ||| | || | ||| |||| | || || ||| || | Sbjct 103600 ATACCCTCCTTGT-CTTGAATCTTCGACTT----GACGTTATCAATGGTATCGGATGATT 103546 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| | ||| ||||| || ||||| || ||||| || ||||||||||| Sbjct 103545 CCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 103494 Score = 122 bits (134), Expect = 8e-23 Identities = 167/232 (72%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| | |||| ||||||||| ||||| || || || Sbjct 103948 CCACCACGGAGGCGGAGAACAAGATGTAACGTGGACTCCTTCTGGATGTTGTAATCAGAC 103889 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||| ||||| ||||||||||| ||||||| || Sbjct 103888 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 103829 Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACT 41810 | || |||||| || ||| || ||| | | | ||| | || || ||||| Sbjct 103828 ATGCCCTCCTTATCTTGGATCTTGGACTTGACGTTATCGATG-----GTATCCGACGACT 103774 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || |||| ||| || || || || || || ||||| ||||| || ||||| Sbjct 103773 CGACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 103722 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | ||||| || || |||||||||||||| ||||| |||||| Sbjct 104177 GCCGCCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 104118 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || | | | || || ||||||||||| || || |||| ||||| ||||||| || Sbjct 104117 CAGCGTCCTCCCATCCTCCAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCCGGTGG 104058 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||| ||| ||| | || | | ||| | | | ||||| ||||| | Sbjct 104057 GATACCCTCCTTATCC-TGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAA 103999 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || |||| ||||| |||||||||||||| Sbjct 103998 CCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 103950 Score = 116 bits (128), Expect = 3e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| ||||| ||||||||| Sbjct 103264 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 103205 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || || |||||||||||||| ||||| || || ||||||| |||| Sbjct 103204 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 103145 Query 41756 ACGCTCTCCTTGTC 41769 | | ||||||||| Sbjct 103144 ATTCCCTCCTTGTC 103131 >seq70 Length=162585 Score = 156 bits (172), Expect = 4e-33 Identities = 163/212 (77%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || || ||| ||||||||| ||||| || || || |||||||| | || ||| Sbjct 32021 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 32080 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| ||||||||||| ||||||| ||||| | |||||||||| | Sbjct 32081 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 32140 Query 41774 ATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || || ||| || | || | ||| ||| |||||||||||| | || || || | Sbjct 32141 ATCTTGGACTTGACATTGTCG--ATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCT 32198 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | |||||||| ||||| ||||| || |||||| Sbjct 32199 TGCCCGTCAGGGTCTTCACGAAGATTTGCATG 32230 >seq100 Length=120018 Score = 118 bits (130), Expect = 1e-21 Identities = 137/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||||| || ||||| | || |||||||||||||| || || | Sbjct 34480 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 34539 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 |||||||||| ||||||| |||| | |||||||||| ||| || ||| || | Sbjct 34540 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 34599 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | ||| ||| ||||| ||||| | || || || || ||||||| ||||| || Sbjct 34600 CG--ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 34657 Query 41851 GAA 41853 ||| Sbjct 34658 GAA 34660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462300700305200