Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq335 102 2e-16
seq34 89.7 1e-12
>seq335
Length=25434
Score = 102 bits (112), Expect = 2e-16
Identities = 309/472 (65%), Gaps = 14/472 (3%)
Strand=Plus/Plus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
||||| |||||||||| |||| | |||||| ||||| | || ||||| |||
Sbjct 12172 TTTGCTCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTC 12231
Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292
| |||| || ||||| ||| || | ||| ||||||| | || ||||||
Sbjct 12232 GCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAG 12291
Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCT 230351
||||| || || ||||||||||| || | | |||| | || | | || | ||
Sbjct 12292 CTCATCTCCCGTGATGAGGGTCTCCA-CACCGACTTCGCCTGCCTCCTCTTCTCCCACCT 12350
Query 230352 C-----CAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAA 230406
| | ||||| | || | | ||| || | ||||||| || || ||
Sbjct 12351 TAGACACCGCCCAAGCAAGCA-----GGCCGTCCAAGACGTCATTACCGAGGCTGTCAGC 12405
Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAA 230466
| ||| | |||||| | ||| || |||| ||| || | ||||||||||| ||
Sbjct 12406 ATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGC-CAA 12464
Query 230467 CTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525
||| ||| || ||||| || ||||| |||||| | | | | | || ||| ||||
Sbjct 12465 CTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGA 12524
Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585
||| ||||| || | ||||| || | || |||||| ||| || || ||| ||
Sbjct 12525 GAAGTACTACAAGTCGACCAACCCATTCGATTTCATGGAGAACATCTCCCTGGCAGGAAA 12584
Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||||||||||||| ||||| ||| ||||| || | | ||||||| |||
Sbjct 12585 GACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGGTGTCATG 12636
>seq34
Length=64445
Score = 89.7 bits (98), Expect = 1e-12
Identities = 199/299 (67%), Gaps = 0/299 (0%)
Strand=Plus/Minus
Query 319369 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 319428
|||| |||||||||| | || || || ||| |||||||||| || || ||||||
Sbjct 3929 AGGGTGTAGTAACTCTTGGCCTCTGGCTTCTGCTTGACGAACTCGGCCAAGTTGCCCTTG 3870
Query 319429 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 319488
|| ||||| || ||||| ||| ||| ||||| || | ||||||
Sbjct 3869 TAGCAGGCGAGCTTCTTTCCGGGCTCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGG 3810
Query 319489 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 319548
|| ||||||||||| || || |||| | | | | || | || | ||||||| ||
Sbjct 3809 AAGCCGGAGTCGTGAGAAACGATCAGGGAAGTGATCTCGGTGTGGGTCTTCAGGTAATCC 3750
Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608
| |||| | ||||| | ||| | || ||||| || ||||| ||||| || |
Sbjct 3749 TGGAGCCACTTGACGTTGGCAACATCCAAGTGATTGGTAGGTTCGTCCAGAAGGAGGACA 3690
Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667
| || |||| | ||| || | || |||||||| ||||| ||||| || ||||| ||
Sbjct 3689 TCAGCCTTCATCAACATAGCTCTAGCGAGAGCGAGCTTCATCTTCCATCCACCGGACAG 3631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057785684623010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |