Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq335 318 6e-82 seq9 118 1e-21 seq2304 109 6e-19 seq50 105 7e-18 >seq335 Length=25434 Score = 318 bits (352), Expect = 6e-82 Identities = 562/812 (69%), Gaps = 23/812 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| || || || |||||||| | |||||| | || || Sbjct 11776 ATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATCTC 11835 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | ||| | || || | |||||| | |||||| Sbjct 11836 TCCAAGGACCTTCACGACTGGAACAATCGCCTCAATGATGATGAGCGCTACTTCATCTCC 11895 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || || || |||||||| ||||| || ||||||||||| || ||||||| Sbjct 11896 CATGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 11955 Query 116813 TTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||| ||||| ||| | | || || || ||||||||||| || || ||| || Sbjct 11956 TTCAG-CAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGAT 12014 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT------GC--GC 116923 |||||| | ||| | || | || || |||||||||||| ||| | || || Sbjct 12015 CGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGC 12074 Query 116924 TCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAG 116983 || |||| | ||| || || ||||||||||| || || ||| |||| || Sbjct 12075 TCAACGGACAT--ACCTC------TTCAATGCCATCGAGACCATTCCTTGCATCAAGAAG 12126 Query 116984 AAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTG 117043 |||||||| ||||| | | |||||| | | || | |||| | |||| || Sbjct 12127 AAGGCCGACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCTACCTTTGCTCAGCGTCTC 12186 Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103 || |||||||| || || ||||| ||||||| || ||| |||||| |||| || ||| Sbjct 12187 GTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGG 12246 Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163 |||||||| || ||||||||| | |||||||| ||| ||||||||||||||| | || Sbjct 12247 CTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGAT 12306 Query 117164 GAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGC 117223 |||||||| || |||||| ||||| | || ||| || | || || || ||| Sbjct 12307 GAGGGTCTCCACACCGACTTCGCCTGCCTCCTCTTCTCCCACCTTAGACACCGCCCAAGC 12366 Query 117224 GCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACC 117283 | | |||| || || | ||||| || ||| ||||||||| ||| | || Sbjct 12367 AAGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCTTGACT 12426 Query 117284 GAAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGA 117342 || || | | || ||||| ||||| || | || | | |||| ||||||||| || Sbjct 12427 GAGGCACTTCCCTGTGCG-CTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 12485 Query 117343 GTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAA 117402 ||||||||||||||||||||||||| || | || ||| ||||||| || |||| Sbjct 12486 GTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGACCAA 12545 Query 117403 CCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||| | || || ||| | ||||||| ||| Sbjct 12546 CCCATTCGATTTCATGGAGAACATCTCCCTGG 12577 >seq9 Length=89190 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || |||||||| || |||||| | || || || | || Sbjct 18124 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 18065 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | ||||| || || | ||||| ||||| || ||| |||||||| Sbjct 18064 GATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 18005 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | |||||||| || |||||| Sbjct 18004 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAAC 17945 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| || || Sbjct 17944 ATCCAGAAGGAGTCCACCCTTCA 17922 >seq2304 Length=1284 Score = 109 bits (120), Expect = 6e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || ||||| || |||| || || | | Sbjct 95 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACGCTCGAGGTTGAGTCGTCG 154 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || || | || || ||||||||||| ||||||| Sbjct 155 GATACCATCGATAACG-TCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCA 213 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||||||||| ||||| || || | | | || ||| ||||||||| Sbjct 214 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGGAGGACGCTCGGCGACTACAA 273 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| |||||| || Sbjct 274 CATCCAGAAGGAGAGCACGCTTCA 297 >seq50 Length=60635 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || | |||||||| ||||||||| | || ||||| || |||| | | Sbjct 21001 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 21060 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| || ||| |||||||||| || || Sbjct 21061 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTG 21120 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || ||||| ||||| || || | ||||| || ||||||||||||||||||| Sbjct 21121 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 21180 Query 40879 G 40879 | Sbjct 21181 G 21181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515200993441520