Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq335 318 6e-82
seq9 118 1e-21
seq2304 109 6e-19
seq50 105 7e-18
>seq335
Length=25434
Score = 318 bits (352), Expect = 6e-82
Identities = 562/812 (69%), Gaps = 23/812 (3%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| || || || |||||||| | |||||| | || ||
Sbjct 11776 ATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATCTC 11835
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
||||||||| ||||||| | ||| | || || | |||||| | ||||||
Sbjct 11836 TCCAAGGACCTTCACGACTGGAACAATCGCCTCAATGATGATGAGCGCTACTTCATCTCC 11895
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|| || || || || |||||||| ||||| || ||||||||||| || |||||||
Sbjct 11896 CATGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 11955
Query 116813 TTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| ||| ||||| ||| | | || || || ||||||||||| || || ||| ||
Sbjct 11956 TTCAG-CAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGAT 12014
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT------GC--GC 116923
|||||| | ||| | || | || || |||||||||||| ||| | || ||
Sbjct 12015 CGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGC 12074
Query 116924 TCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAG 116983
|| |||| | ||| || || ||||||||||| || || ||| |||| ||
Sbjct 12075 TCAACGGACAT--ACCTC------TTCAATGCCATCGAGACCATTCCTTGCATCAAGAAG 12126
Query 116984 AAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTG 117043
|||||||| ||||| | | |||||| | | || | |||| | |||| ||
Sbjct 12127 AAGGCCGACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCTACCTTTGCTCAGCGTCTC 12186
Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103
|| |||||||| || || ||||| ||||||| || ||| |||||| |||| || |||
Sbjct 12187 GTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGG 12246
Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163
|||||||| || ||||||||| | |||||||| ||| ||||||||||||||| | ||
Sbjct 12247 CTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGAT 12306
Query 117164 GAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGC 117223
|||||||| || |||||| ||||| | || ||| || | || || || |||
Sbjct 12307 GAGGGTCTCCACACCGACTTCGCCTGCCTCCTCTTCTCCCACCTTAGACACCGCCCAAGC 12366
Query 117224 GCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACC 117283
| | |||| || || | ||||| || ||| ||||||||| ||| | ||
Sbjct 12367 AAGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCTTGACT 12426
Query 117284 GAAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGA 117342
|| || | | || ||||| ||||| || | || | | |||| ||||||||| ||
Sbjct 12427 GAGGCACTTCCCTGTGCG-CTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 12485
Query 117343 GTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAA 117402
||||||||||||||||||||||||| || | || ||| ||||||| || ||||
Sbjct 12486 GTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGACCAA 12545
Query 117403 CCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
||| | || || ||| | ||||||| |||
Sbjct 12546 CCCATTCGATTTCATGGAGAACATCTCCCTGG 12577
>seq9
Length=89190
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || |||||||| || |||||| | || || || | ||
Sbjct 18124 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 18065
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | ||||| || || | ||||| ||||| || ||| ||||||||
Sbjct 18064 GATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 18005
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| ||||| ||||| || || | |||||||| || ||||||
Sbjct 18004 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAAC 17945
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| |||| || ||
Sbjct 17944 ATCCAGAAGGAGTCCACCCTTCA 17922
>seq2304
Length=1284
Score = 109 bits (120), Expect = 6e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || ||||| || |||| || || | |
Sbjct 95 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACGCTCGAGGTTGAGTCGTCG 154
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| ||||| || || | || || ||||||||||| |||||||
Sbjct 155 GATACCATCGATAACG-TCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCA 213
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || || | ||||||||| ||||| || || | | | || ||| |||||||||
Sbjct 214 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGGAGGACGCTCGGCGACTACAA 273
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| |||||| ||
Sbjct 274 CATCCAGAAGGAGAGCACGCTTCA 297
>seq50
Length=60635
Score = 105 bits (116), Expect = 7e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || | |||||||| ||||||||| | || ||||| || |||| | |
Sbjct 21001 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 21060
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| ||||| || ||| |||||||||| || ||
Sbjct 21061 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTG 21120
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| || ||||| ||||| || || | ||||| || |||||||||||||||||||
Sbjct 21121 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 21180
Query 40879 G 40879
|
Sbjct 21181 G 21181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515200993441520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |