Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq9 113 4e-20 seq2304 104 2e-17 seq50 89.7 4e-13 >seq9 Length=89190 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 |||||| || | ||||| |||||||| | || ||||| || || ||||||||||| Sbjct 17897 ACCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 17956 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||||| |||||||||||| || || ||| |||| || |||||||| || || || Sbjct 17957 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 18016 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || ||||||||||| || || || || | |||| || || | ||| || Sbjct 18017 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCAC 18076 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||| | ||| | || ||||| ||||| || || || || || |||||| || Sbjct 18077 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 18128 >seq2304 Length=1284 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||| || || |||||||| |||| | || | | |||||| Sbjct 304 CACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCCGAGCGTCCTCCCATCCTC 245 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| | || || |||||||| || || || ||||||||||| ||| Sbjct 244 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTG 185 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||| |||| ||| ||||||| || | || || Sbjct 184 GATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCAACCTCGAGCGTAATGGTCTT 125 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| || || || ||||||||||| Sbjct 124 TCCGGTCAAGGTCTTGACGAAAATCTGCAT 95 >seq50 Length=60635 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||| | |||||| |||||||||||| || ||||| |||| Sbjct 21179 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 21120 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 || |||||||| || || || || |||||||||||| || || || || | ||| Sbjct 21119 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 21060 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | || || | | ||||||||| | ||| | || ||||| |||| || || || || Sbjct 21059 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 21001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433815452780284