Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq9 107 2e-18 seq2304 100 3e-16 >seq9 Length=89190 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| || || |||||||| | || || || | || || Sbjct 17916 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 17975 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || ||||| || || ||||||||||| | || | | |||||||||| | Sbjct 17976 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 18035 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || |||| | | | || ||| ||| ||||| || | ||||| || ||| Sbjct 18036 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 18095 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || ||||| || ||||||||||| Sbjct 18096 CCCGTCAGGGTCTTCACGAAGATTTGCAT 18124 >seq2304 Length=1284 Score = 100 bits (110), Expect = 3e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 42949 CCTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 43008 ||||||| || || | | ||| | |||||| || | ||||||||||| || || |||| Sbjct 329 CCTATTGGCCGCCACGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGT 270 Query 43009 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 43068 | || | || |||| | | || || |||||||| || ||||| || || |||||||||| Sbjct 269 AGTCGCCGAGCGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGT 210 Query 43069 CGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCG 43128 | | || | || |||||| || ||| || |||| | | | || || || Sbjct 209 CCGGTGGGATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACG 150 Query 43129 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || |||| ||| ||||| || || || | ||||| || || || ||||| Sbjct 149 ACTCAACCTCGAGCGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571797393395560