Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq442 239 4e-58 seq335 165 7e-36 seq9 104 2e-17 >seq442 Length=20621 Score = 239 bits (264), Expect = 4e-58 Identities = 1163/1836 (63%), Gaps = 35/1836 (2%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 ||||||| || || ||||| || ||||| || || | |||||| | ||| || || | Sbjct 18658 TGGTGCGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGG 18599 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 | || | || || | || | ||||| | |||| ||||| ||||||| Sbjct 18598 ATGTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGA 18539 Query 22263 TAAACGCTCCTCGATCGGCGGC-CATATTTATCAATGTACGCATCGACATTTCCCATACG 22321 | || || || || |||||||| | | | | | || | | ||| || ||||| ||| Sbjct 18538 TGAAGGCACCGCGGTCGGCGGCTCGTCTCGACGATGGTGCCCTGCGAGATCTCCCAGACG 18479 Query 22322 GTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTA 22381 |||||||| || | |||| || || || ||| |||||| ||| ||| Sbjct 18478 GTCTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATGTTCTGGATGGAGCCGCCG 18419 Query 22382 T-TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTT 22440 | || | ||||| || | ||| ||| ||| | ||| ||| || || || || Sbjct 18418 TCTGCG-ATGATGCGGTTCTCGATCTGGTCGGACCAGAGACCCATGTCGACCAGGTCCTT 18360 Query 22441 GACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTT 22500 || || |||| || ||||| |||||||| | || ||| || || ||| ||||| Sbjct 18359 GAGCAACCAGGGGTTGACGACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAGATGTT 18300 Query 22501 GGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGG 22560 || ||| | || ||||| | || ||| || || ||||| | ||| || || || || Sbjct 18299 CGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGG 18240 Query 22561 CATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGC 22618 ||| || || | || || ||||| | | ||||||| |||| | || ||| Sbjct 18239 CATGGGTGCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGA 18180 Query 22619 ATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACG 22678 || |||||||||||| |||| || || || | ||||||| |||||||| | | | Sbjct 18179 GTC--CCAGTCCCACAGGTCGGTAGGAGTAAC---GCCCCACATGTCGTATTGGAGCTCA 18125 Query 22679 CCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCG 22738 || | | ||| || ||||| || ||||||| || | ||| ||| || || Sbjct 18124 CCCTTGGACACTGGGGATCCCTCGTAGGTCTCGTACGTGCCGTGAATCTGGGCCAGCTCC 18065 Query 22739 CAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCA---ATTCG 22795 | || ||| || |||| || || || |||||||| | ||| | | | | Sbjct 18064 ACGGAGGCAGTCAAGGCACCGTGGTAGATGGTTTCGAAGATCTGGGAGTTGAGGAACTTG 18005 Query 22796 GCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGA 22855 || ||| || | || | || | || | || ||| || || || | |||||| Sbjct 18004 GCCTCGG-GAGAAT--CGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGG 17948 Query 22856 ACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATAC 22915 || || | | | || | || | || ||| ||||| || | || || Sbjct 17947 ACACCAACGGCAACTGGCCTGTGACGGAAGTTGCTGCGTTTGGCCTCCGGGACGGGGTAG 17888 Query 22916 CAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNN 22975 | || ||| || | |||||||||| || |||| | || | Sbjct 17887 TAGTTGACATCAATGATCTTGTTCAAGTTCTTGACGACAACCTGTGTGACCTCGTGAAGC 17828 Query 22976 NNNTCAAAGTCGTAAACGCCCGAT-----TGTACAACAAACTTGTTGAC--GGCGATCGA 23028 | ||||||||| ||| | | ||| ||||| || |||| | ||| | || Sbjct 17827 TTCTGGAAGTCGTAAGTGCC-GTTGGCCATGT-CAACATAC--GTTGGCAGGGCAAGGGA 17772 Query 23029 GGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAG 23088 || | || || ||||||||||| ||| | | |||||| || || || || || || Sbjct 17771 CGCCAAGTTACACACGGCCACCTCATCTGGAGCAGAGTACTCGACGATCTCTGTGCACAG 17712 Query 23089 ATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTT 23148 ||| | || || || | || |||||||||| || || ||||| | |||||| Sbjct 17711 GTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTT 17652 Query 23149 GTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGT 23208 ||| | |||| | || | || ||||| ||| ||||||| || | ||| | | Sbjct 17651 GTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTT 17592 Query 23209 CTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGT 23267 ||| || | | | ||| || ||| || || | |||||| | || | ||| | Sbjct 17591 CTGGGCCTTGATA-GTCTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTCGAGCGCCT 17533 Query 23268 CAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCC 23327 | | ||| | |||||| || |||| || || ||| | || |||||||| ||| Sbjct 17532 CGAGCTCGTCGCCGTAAACATCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTCC 17473 Query 23328 ACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACA 23387 | || || || || || |||| || |||||||| ||||| ||||||||||||| Sbjct 17472 AGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAACA 17413 Query 23388 GTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACA 23447 || ||||| || || ||||| || ||| ||||||| |||| |||| || || || | Sbjct 17412 AGTCACGGGCACGGACTTCCTCCTTACCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGA 17353 Query 23448 CGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCT 23507 | ||||| ||||| ||||| | ||| | ||| || || || || | ||| ||||| || | Sbjct 17352 CATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCTT 17293 Query 23508 GATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACG 23567 | || ||||| | || ||||||||| |||| | ||||| || || | ||||| || Sbjct 17292 GGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAGT 17233 Query 23568 CGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTA 23627 ||| || || | | ||| | || || | ||| | | || || | Sbjct 17232 TTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCGA 17173 Query 23628 TGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGA 23687 | ||||| | | || || ||||| || || || || ||||| ||||| ||||| | Sbjct 17172 TACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCAA 17113 Query 23688 TGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGG 23747 | || ||||| || | |||||||||| || || || | || || | || ||| | | Sbjct 17112 TACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTGGTGTACCAG 17053 Query 23748 CCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGT 23807 | ||| ||||| ||| ||||| || |||||| ||||| || ||||| || | Sbjct 17052 CATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCT 16993 Query 23808 CGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATT 23867 |||| | ||||| ||||| ||||| || || | || || ||||| ||||||| | Sbjct 16992 CGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAATCATGTGCT 16933 Query 23868 GAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTT 23924 | || |||| | ||| | ||| | || | || || || || || | || || | Sbjct 16932 GTGGCCTCTCAGCAACCTT---GCCATCAAGTCGGAGAAGGTAGGATCGCTCCAGGGTCT 16876 Query 23925 TAAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960 | || || || || | ||||| || ||||| |||| Sbjct 16875 TGAAGCCGAAGTATTGGTAGTTGAAATCACGGTCGT 16840 >seq335 Length=25434 Score = 165 bits (182), Expect = 7e-36 Identities = 545/837 (65%), Gaps = 23/837 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| |||||||| || ||||| | || || | || || Sbjct 11776 ATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATCTC 11835 Query 57630 TCTAAGGATCTGAGCGATTGGGAT--TC-CCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | || |||||| || |||| | | || || Sbjct 11836 TCCAAGGACCTTCACGACTGGAACAATCGCCTCAATGATGATGAGCGCTACTTCATCTCC 11895 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 || || | || || |||||||| || || || ||||| |||||||| | |||| | Sbjct 11896 CATGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 11955 Query 57747 TTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 || || || | || || | | || || | ||||| ||||| || ||| | | Sbjct 11956 TT--CAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGA 12013 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || ||| | || | || | || || || |||||||| || ||| | ||||| | | Sbjct 12014 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGG 12073 Query 57865 A-CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 | | || || || ||||| || ||||| || || || ||| |||||||| Sbjct 12074 CTCAACGGACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 12132 Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980 || ||| || | | ||||| || | | || | || || || || | || | Sbjct 12133 GACTGGGCAGTTAGGTGGATCCAA---GATAAGGATTCTACCTTTGCTCAGCGTCTCGTT 12189 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||| || || || ||||| ||||| || ||| ||| || | || || ||| | Sbjct 12190 GCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTC 12249 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||| ||| | |||||||| || |||||| | || || || || ||| Sbjct 12250 AAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGATGAG 12309 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG---ACG 58157 |||||||| || || || || ||||| | | ||| ||| || | | |||| | | Sbjct 12310 GGTCTCCACACCGACTTCGCCTGCCTCCTCTTCTCCCACCTT----AGACACCGCCCAAG 12365 Query 58158 C-GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | | | | || ||| | || |||||||| ||| ||||| | ||||| | || Sbjct 12366 CAAGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCTTGAC 12425 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 || || || || || ||||||| |||||| | |||||| | |||||||| Sbjct 12426 TGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 12485 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTACAACACGAAAAA 58336 ||| || |||||||| || ||||| || | ||| | ||||| ||| || Sbjct 12486 GTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGACCAA 12545 Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaa 58393 || || ||||| ||| | ||||| || | || ||||| ||||| ||||| || Sbjct 12546 CCCATTCGATTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAGAA 12602 >seq9 Length=89190 Score = 104 bits (114), Expect = 2e-17 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| ||||| ||||| || |||||| | || || || |||| Sbjct 18125 CATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTC 18066 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | | |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 18065 CGATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 18006 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || || || | ||||| || Sbjct 18005 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAA 17946 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 ||| || || || || || ||||| |||| || ||||| | || ||| ||||||| Sbjct 17945 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTGAGACTTCGTGGAGGTGCCAAGAAGCG 17886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445750647729840