Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq442 116 7e-21
seq335 95.1 2e-14
>seq442
Length=20621
Score = 116 bits (128), Expect = 7e-21
Identities = 181/256 (71%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| |||||||||||||| ||||| || || ||| || || ||||| ||||||
Sbjct 17176 CCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCC 17117
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904
||||| ||||| || | | | | | | |||||| || ||||| |||| |||| |||
Sbjct 17116 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTG-GTGT 17058
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || ||||| |||||||| || || || || | |||||||| | ||
Sbjct 17057 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 16998
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||| || || | || || ||||||||||| || || ||||||||||||||
Sbjct 16997 TGTCTCGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAATCAT 16938
Query 95025 GTCCTGAGGGCGCTCA 95040
|| ||| || | ||||
Sbjct 16937 GTGCTGTGGCCTCTCA 16922
>seq335
Length=25434
Score = 95.1 bits (104), Expect = 2e-14
Identities = 158/228 (69%), Gaps = 9/228 (4%)
Strand=Plus/Plus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATT------T 101904
|||||||||||||| | ||||| ||| ||||| ||| |||| |||| |
Sbjct 12117 CATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAG---ATAAGGATTCTACCTT 12173
Query 101905 GGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGC 101964
|| | | | |||||||| ||||| ||||| || |||||||| || | |||||
Sbjct 12174 TGCTCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGC 12233
Query 101965 ATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTT 102024
|||||||||||| ||||||| | || | || |||| || |||| ||| || ||| |
Sbjct 12234 CTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCT 12293
Query 102025 CATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
||| || | || || ||||| || |||||| || ||| | || ||
Sbjct 12294 CATCTCCCGTGATGAGGGTCTCCACACCGACTTCGCCTGCCTCCTCTT 12341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989548156339785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |