Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq442 116 7e-21 seq335 95.1 2e-14 >seq442 Length=20621 Score = 116 bits (128), Expect = 7e-21 Identities = 181/256 (71%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| |||||||||||||| ||||| || || ||| || || ||||| |||||| Sbjct 17176 CCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCC 17117 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904 ||||| ||||| || | | | | | | |||||| || ||||| |||| |||| ||| Sbjct 17116 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTG-GTGT 17058 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| ||| || ||||| |||||||| || || || || | |||||||| | || Sbjct 17057 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 16998 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 ||| || || | || || ||||||||||| || || |||||||||||||| Sbjct 16997 TGTCTCGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAATCAT 16938 Query 95025 GTCCTGAGGGCGCTCA 95040 || ||| || | |||| Sbjct 16937 GTGCTGTGGCCTCTCA 16922 >seq335 Length=25434 Score = 95.1 bits (104), Expect = 2e-14 Identities = 158/228 (69%), Gaps = 9/228 (4%) Strand=Plus/Plus Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATT------T 101904 |||||||||||||| | ||||| ||| ||||| ||| |||| |||| | Sbjct 12117 CATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAG---ATAAGGATTCTACCTT 12173 Query 101905 GGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGC 101964 || | | | |||||||| ||||| ||||| || |||||||| || | ||||| Sbjct 12174 TGCTCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGC 12233 Query 101965 ATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTT 102024 |||||||||||| ||||||| | || | || |||| || |||| ||| || ||| | Sbjct 12234 CTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCT 12293 Query 102025 CATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 ||| || | || || ||||| || |||||| || ||| | || || Sbjct 12294 CATCTCCCGTGATGAGGGTCTCCACACCGACTTCGCCTGCCTCCTCTT 12341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989548156339785