Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq335 165 1e-35
seq442 141 1e-28
seq276 91.5 2e-13
>seq335
Length=25434
Score = 165 bits (182), Expect = 1e-35
Identities = 372/558 (67%), Gaps = 6/558 (1%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| | || || || ||||| | || ||| | |||||
Sbjct 11776 ATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATCTC 11835
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||||| |||| ||| | | ||| | | ||| |||||| | || || ||
Sbjct 11836 TCCAAGGACCTTCACGACTGGAACAATCGCCTCAATGATGATGAGCGCTACTTCATCTCC 11895
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
|| || | || ||||| |||| || || ||||| |||||||| || || | ||
Sbjct 11896 CATGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 11955
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
||| ||| | || ||||| | ||||| ||||| ||||||||||||||
Sbjct 11956 TTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 12015
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315
|||||| | ||| | || | ||||| || || |||| ||||| || | |
Sbjct 12016 GAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGCT 12075
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
||||| | | || ||||| || || ||||| || | || | || || |||||
Sbjct 12076 CAACGGACATAC---CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 12132
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| || |||||||| | || | | ||| | | || | | || || ||
Sbjct 12133 GACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCTACCTTTGCTCAGCGTCTCGTTGCC 12192
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
||||| || || ||||| |||||||| || || || || |||| || |||||||||
Sbjct 12193 TTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTCAAG 12252
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
||||| || |||||| | || ||||| | |||||| | || || || || |||||
Sbjct 12253 AAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGATGAGGGT 12312
Query 125556 CTACACTGTGACTTTGCC 125573
|| ||| ||||| |||
Sbjct 12313 CTCCACACCGACTTCGCC 12330
>seq442
Length=20621
Score = 141 bits (156), Expect = 1e-28
Identities = 359/541 (66%), Gaps = 4/541 (1%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| ||||| ||| | | ||| | || || |||||| | ||| ||| | || |
Sbjct 17223 ACCAACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGG 17282
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
|||||| || || ||||| || || || || ||| | ||| ||||| | || || |||
Sbjct 17283 TACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGG 17342
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
|||||||| || ||||| || | || || | || ||| || || || | ||
Sbjct 17343 CACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGTAAGGAGGAAGTCCGT 17402
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
||| | |||||||| || || |||||| | || ||| | ||||||||||| ||| | |
Sbjct 17403 GCCCGTGACTTGTTCTACGCTCTCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAG 17462
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
||| |||||| ||| ||||||||| || | || || || | ||| | |||
Sbjct 17463 AACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGATGTTTACGGC 17522
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGG-CCGATACGTGAGACGAGT 97165
|| ||| | ||||| || || ||||||| | ||||| | || |||| | |
Sbjct 17523 GACGAGCTCGAGGCGCTCGACGAGGGCTACGAGAAGGAGGGTAAGGGTCGCAAGACTA-T 17581
Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
| | || | |||| || ||| | |||| | | ||||| ||||| |||| || |
Sbjct 17582 CAAGGC-CCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTT 17640
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284
||| | ||||||||| | || ||||| |||||||| || | || ||||||
Sbjct 17641 TCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCC 17700
Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTT 97344
||||||| |||||||| || || || |||||| | |||| || ||| ||| || |
Sbjct 17701 GCAGCTCCAACCTGTGCACAGAGATCGTCGAGTACTCTGCTCCAGATGAGGTGGCCGTGT 17760
Query 97345 G 97345
|
Sbjct 17761 G 17761
>seq276
Length=28903
Score = 91.5 bits (100), Expect = 2e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 70064 GAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTA 70123
||||| ||||| || || || ||||||||||||||| |||||| || ||||||| ||
Sbjct 13783 GAGGGTGATCTCGGCCCTGTCTACGGATTCCAGTGGCGGCACTTTGGGGCCAAGTACGTG 13724
Query 70124 GACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCA 70161
||| | |||| ||||| |||| ||||||||||||||
Sbjct 13723 GACGCCCAGACGGACTACACGGGACAGGGTGTTGATCA 13686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741033012820520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |