Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq335 165 1e-35 seq442 141 1e-28 seq276 91.5 2e-13 >seq335 Length=25434 Score = 165 bits (182), Expect = 1e-35 Identities = 372/558 (67%), Gaps = 6/558 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| | || || || ||||| | || ||| | ||||| Sbjct 11776 ATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATCTC 11835 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | ||| | | ||| |||||| | || || || Sbjct 11836 TCCAAGGACCTTCACGACTGGAACAATCGCCTCAATGATGATGAGCGCTACTTCATCTCC 11895 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 || || | || ||||| |||| || || ||||| |||||||| || || | || Sbjct 11896 CATGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 11955 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 ||| ||| | || ||||| | ||||| ||||| |||||||||||||| Sbjct 11956 TTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 12015 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315 |||||| | ||| | || | ||||| || || |||| ||||| || | | Sbjct 12016 GAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGCT 12075 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 ||||| | | || ||||| || || ||||| || | || | || || ||||| Sbjct 12076 CAACGGACATAC---CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 12132 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| || |||||||| | || | | ||| | | || | | || || || Sbjct 12133 GACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCTACCTTTGCTCAGCGTCTCGTTGCC 12192 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 ||||| || || ||||| |||||||| || || || || |||| || ||||||||| Sbjct 12193 TTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTCAAG 12252 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 ||||| || |||||| | || ||||| | |||||| | || || || || ||||| Sbjct 12253 AAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGATGAGGGT 12312 Query 125556 CTACACTGTGACTTTGCC 125573 || ||| ||||| ||| Sbjct 12313 CTCCACACCGACTTCGCC 12330 >seq442 Length=20621 Score = 141 bits (156), Expect = 1e-28 Identities = 359/541 (66%), Gaps = 4/541 (1%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || ||||| ||| | | ||| | || || |||||| | ||| ||| | || | Sbjct 17223 ACCAACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGG 17282 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 |||||| || || ||||| || || || || ||| | ||| ||||| | || || ||| Sbjct 17283 TACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGG 17342 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 |||||||| || ||||| || | || || | || ||| || || || | || Sbjct 17343 CACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGTAAGGAGGAAGTCCGT 17402 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 ||| | |||||||| || || |||||| | || ||| | ||||||||||| ||| | | Sbjct 17403 GCCCGTGACTTGTTCTACGCTCTCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAG 17462 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 ||| |||||| ||| ||||||||| || | || || || | ||| | ||| Sbjct 17463 AACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGATGTTTACGGC 17522 Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGG-CCGATACGTGAGACGAGT 97165 || ||| | ||||| || || ||||||| | ||||| | || |||| | | Sbjct 17523 GACGAGCTCGAGGCGCTCGACGAGGGCTACGAGAAGGAGGGTAAGGGTCGCAAGACTA-T 17581 Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224 | | || | |||| || ||| | |||| | | ||||| ||||| |||| || | Sbjct 17582 CAAGGC-CCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTT 17640 Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284 ||| | ||||||||| | || ||||| |||||||| || | || |||||| Sbjct 17641 TCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCC 17700 Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTT 97344 ||||||| |||||||| || || || |||||| | |||| || ||| ||| || | Sbjct 17701 GCAGCTCCAACCTGTGCACAGAGATCGTCGAGTACTCTGCTCCAGATGAGGTGGCCGTGT 17760 Query 97345 G 97345 | Sbjct 17761 G 17761 >seq276 Length=28903 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 70064 GAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTA 70123 ||||| ||||| || || || ||||||||||||||| |||||| || ||||||| || Sbjct 13783 GAGGGTGATCTCGGCCCTGTCTACGGATTCCAGTGGCGGCACTTTGGGGCCAAGTACGTG 13724 Query 70124 GACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCA 70161 ||| | |||| ||||| |||| |||||||||||||| Sbjct 13723 GACGCCCAGACGGACTACACGGGACAGGGTGTTGATCA 13686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741033012820520