Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq2304 86.0 5e-12
seq9 82.4 6e-11
>seq2304
Length=1284
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCG-CTCGTCCT 48575
||| || ||||| ||||||||||| || |||||||| || ||| | ||| | | ||||
Sbjct 304 CACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GCCGAGCGTCCTCCCATCCT 246
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
| |||||||| || || |||| | |||||||| ||| || | | ||||| ||
Sbjct 245 CGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTT 186
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
|| || ||||| | |||||||| | ||||| ||||| || ||||| |
Sbjct 185 GGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCAACCTCGAGCGTAATGGTCT 126
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| ||||| | || || || |||||||||||
Sbjct 125 TTCCGGTCAAGGTCTTGACGAAAATCTGCAT 95
>seq9
Length=89190
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
|||||| || | || | || || ||||| ||| |||||| || ||||||||||| |
Sbjct 17897 ACCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCG- 17955
Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617
|| || || | ||||| |||||||| ||| || | || | |||||||| ||| |
Sbjct 17956 AAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGG 18015
Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677
| | | ||||||||| || || ||||| | | || ||||||| ||||||
Sbjct 18016 GAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCA 18075
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | || || || || || || || || ||||| || || |||||
Sbjct 18076 CCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421236686184827
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |