Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq442 185 1e-41 seq335 122 1e-22 >seq442 Length=20621 Score = 185 bits (204), Expect = 1e-41 Identities = 478/720 (66%), Gaps = 14/720 (2%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 |||| |||||| || |||||| |||||||||| ||||| | || ||||| | | | Sbjct 17533 TCGAGCTCGTCGCCGTAAACATCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTC 17474 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 63256 || || |||| | || || || ||||| |||||||| |||||||| ||||| || || Sbjct 17473 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAAC 17414 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 || || | || | |||||| || || |||||| | | || |||||| | | Sbjct 17413 AAG-TCACGGGCACGGACTTCCTCCTTACCGTGGTTCTTTCTCAAGTCCAGGAACTCAAA 17355 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 | ||| | ||||| || || | ||| ||||| | | | ||||| || ||||| || || Sbjct 17354 GACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACC 17295 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 || || | ||| || |||||||| || | || | | ||| || | ||| ||||| || Sbjct 17294 TTGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGA 17235 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATA---TTACTAATTGATAG 63493 | || |||||||||| || || ||| ||||||| ||| | || | || Sbjct 17234 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAAT-- 17177 Query 63494 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACC 63553 || || || || || | || ||||| | || || || | |||||||||||||| Sbjct 17176 -CCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACC 17118 Query 63554 CTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 63613 ||| || ||||| || |||||| | | || ||| || | ||| | || Sbjct 17117 CTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTGGTGT 17058 Query 63614 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63673 || ||||| || | || || |||||||| || || |||| ||| | || ||||| Sbjct 17057 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 16998 Query 63674 CGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACA 63732 ||||| || | || |||||| || | ||||| || || || |||||||| | || Sbjct 16997 TGTCTCGATTGTCTTCTCAATATCCTCACCG-TGAATGCCCACCGCAACACGCATAATCA 16939 Query 63733 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63792 ||||||| || || ||| | | |||| | | | | | ||||||| |||| | Sbjct 16938 TGTGCTGTGGCCTCTCAGCAACCTTGCCATCAAGTCGGAGAAGGTAGGATCGCTCCAGGG 16879 Query 63793 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 | || || || || || | ||| ||||| || || ||||| | | | | |||||||| Sbjct 16878 TCTTGAAGCCGAAGTATTGGTAGTTGAAA--TCACGGTCGTAGAGGACAGCAGAGTTGAG 16821 >seq335 Length=25434 Score = 122 bits (134), Expect = 1e-22 Identities = 362/557 (65%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| ||| ||| |||||||| || | || || ||||| || || || || Sbjct 12332 CAGGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGG 12273 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || | ||| ||||||||||| || ||||| || ||||| ||||| || || || |||||| Sbjct 12272 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAG 12213 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33480 || || || || ||||| ||||||| || | || || | | | | || || Sbjct 12212 ATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTATCTTGG 12153 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 |||||| | ||||| ||||||||||| || | ||||| || || || |||||||| Sbjct 12152 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 12093 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 ||||| || | || | || || | || || ||||| | || || | Sbjct 12092 AAGAGGTATGTCCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 12033 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 || | |||||||| || || || || || |||||||| || | || || | ||| Sbjct 12032 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATC 11973 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || || || | | || || || | || || || || ||||||||| || || Sbjct 11972 TGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCG 11913 Query 33721 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAA 33777 || || || | ||||| || || || || || | | | || ||||| Sbjct 11912 AAGAAAGCGAGAACATGGGAGATGAAGTAGCGCTCATCATCATTGAGGCGATTGTTCCAG 11853 Query 33778 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33837 || | | || || || | ||| | || || ||||||| || ||||| || ||||| Sbjct 11852 TCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGATGCTTCCGCCTTC 11793 Query 33838 TTATACATGTTCCAGAT 33854 || ||||| | |||||| Sbjct 11792 TTGTACATCTGCCAGAT 11776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622925186603320