Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2304 170 4e-37
seq50 120 6e-22
seq34 105 1e-17
>seq2304
Length=1284
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||||||| |||||| ||| || |||||||| || ||| |
Sbjct 321 CCGCCACGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCCG 262
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| ||||||||||| || | |||||| || ||||| || || | || ||||| |||||
Sbjct 261 AGCGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 202
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| ||||| ||||| | ||||||| |||||||| || | || || ||
Sbjct 201 ATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCAACC 142
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || ||||| ||||| || | |||||||||||| ||||||||
Sbjct 141 TCGAGCGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 95
>seq50
Length=60635
Score = 120 bits (132), Expect = 6e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||||| || || | ||||| || | |||||| || || || ||
Sbjct 21179 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 21120
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || ||||| || ||||||||||| ||||| | |||||| |||
Sbjct 21119 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 21060
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | || || || || | ||||||||| || ||||| | ||||||||||||
Sbjct 21059 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 21001
>seq34
Length=64445
Score = 105 bits (116), Expect = 1e-17
Identities = 150/209 (72%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 225432 CCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCG 225491
||| ||| ||| | || |||||||| |||||||| || || || | ||| | | | |
Sbjct 3829 CCGTGCAGACTTCATCGAGGAAGCCGGAGTCGTGAGAAACGATCAGGGAAGTGATCTCGG 3770
Query 225492 TCAGGCCCTTGAGGTG--CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGT 225549
| || ||| |||| | || |||||| |||||| || |||| ||| || ||
Sbjct 3769 TGTGGGTCTTCAGGTAATCCTG--GAGCCACTTGACGTTGGCAACATCCAAGTGATTGGT 3712
Query 225550 AGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTT 225609
||||||||||||||| |||| ||||| | || | || || | | ||||| |||||
Sbjct 3711 AGGTTCGTCCAGAAGGAGGACATCAGCCTTCATCAACATAGCTCTAGCGAGAGCGAGCTT 3652
Query 225610 CATTTTCCAGCCCCCGGACAGGGAGCCGA 225638
||| ||||| || ||||||||||||||||
Sbjct 3651 CATCTTCCATCCACCGGACAGGGAGCCGA 3623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921589832168440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |