Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq2304 132 1e-25
seq9 109 1e-18
seq50 100 7e-16
seq335 93.3 1e-13
>seq2304
Length=1284
Score = 132 bits (146), Expect = 1e-25
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330
|||| |||||| || || ||||| || |||||| ||||||| | || || || | ||
Sbjct 297 TGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCCGAGCGTCCTCCCATCCTCGAGCTGC 238
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| || ||||| ||||| ||||| || |||||| || || ||||| ||||| ||
Sbjct 237 TTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTA 178
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
| || ||||| || || | ||| ||| || || |||||||| || ||||| ||||||
Sbjct 177 GACTTGACGTTATCGATGGTATCCGACGACTCAACCTCGAGCGTAATGGTCTTTCCGGTC 118
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
| ||||||||||| ||||||||
Sbjct 117 AAGGTCTTGACGAAAATCTGCAT 95
>seq9
Length=89190
Score = 109 bits (120), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || || ||||| || || | |||| ||| || || ||||| || || || |
Sbjct 17898 CCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 17957
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || ||||||||||| ||||| || || |||
Sbjct 17958 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG---GTCCGGG 18014
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || |||||||| || | || || || || |||| |||| ||| ||
Sbjct 18015 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCC 18074
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| || ||||| ||||| ||||| || |||||
Sbjct 18075 ACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18124
>seq50
Length=60635
Score = 100 bits (110), Expect = 7e-16
Identities = 132/182 (73%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| || |||||||| || || | || || || || ||||||
Sbjct 21179 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 21120
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| ||||| || || ||| ||||| || || || ||||| |||| || || ||
Sbjct 21119 AGGCGCTGCTGG---TCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTG 21063
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| |||| |||| || || || || || ||||| ||||| || |||| |||||||||
Sbjct 21062 TCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACG 21003
Query 288463 AA 288464
||
Sbjct 21002 AA 21001
>seq335
Length=25434
Score = 93.3 bits (102), Expect = 1e-13
Identities = 157/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 269117 AAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGA 269176
|||||||| | ||| || | || ||| | || |||| ||||| ||| | | ||||
Sbjct 12413 AAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGA 12472
Query 269177 ATCAATATATCGAATTCGTGGCTGATCGTAT-CTTCACGGCACTCGGTTATGAGAAAGTG 269235
| ||||| || || ||||| || || | | || | | | |||||| | |||||
Sbjct 12473 AGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCC-CTCGGTAACGAGAAGTAC 12531
Query 269236 TACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAAC 269295
||||| |||| || || |||| || ||||| || || || | ||||||||| |||
Sbjct 12532 TACAAGTCGACCAACCCATTCGATTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAAC 12591
Query 269296 TTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG 269340
|||||||| ||||| ||| |||||| ||| ||||||| |||
Sbjct 12592 TTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGGTGTCATG 12636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179611671811706
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |