Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2304 132 1e-25 seq9 109 1e-18 seq50 100 7e-16 seq335 93.3 1e-13 >seq2304 Length=1284 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| |||||| || || ||||| || |||||| ||||||| | || || || | || Sbjct 297 TGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCCGAGCGTCCTCCCATCCTCGAGCTGC 238 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || ||||| ||||| ||||| || |||||| || || ||||| ||||| || Sbjct 237 TTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTA 178 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 | || ||||| || || | ||| ||| || || |||||||| || ||||| |||||| Sbjct 177 GACTTGACGTTATCGATGGTATCCGACGACTCAACCTCGAGCGTAATGGTCTTTCCGGTC 118 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 | ||||||||||| |||||||| Sbjct 117 AAGGTCTTGACGAAAATCTGCAT 95 >seq9 Length=89190 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || ||||| || || | |||| ||| || || ||||| || || || | Sbjct 17898 CCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 17957 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||||||||| ||||| || || ||| Sbjct 17958 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG---GTCCGGG 18014 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || |||||||| || | || || || || |||| |||| ||| || Sbjct 18015 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCC 18074 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 18075 ACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18124 >seq50 Length=60635 Score = 100 bits (110), Expect = 7e-16 Identities = 132/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| || |||||||| || || | || || || || |||||| Sbjct 21179 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 21120 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| || || ||| ||||| || || || ||||| |||| || || || Sbjct 21119 AGGCGCTGCTGG---TCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTG 21063 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| |||| || || || || || ||||| ||||| || |||| ||||||||| Sbjct 21062 TCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACG 21003 Query 288463 AA 288464 || Sbjct 21002 AA 21001 >seq335 Length=25434 Score = 93.3 bits (102), Expect = 1e-13 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 269117 AAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGA 269176 |||||||| | ||| || | || ||| | || |||| ||||| ||| | | |||| Sbjct 12413 AAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGA 12472 Query 269177 ATCAATATATCGAATTCGTGGCTGATCGTAT-CTTCACGGCACTCGGTTATGAGAAAGTG 269235 | ||||| || || ||||| || || | | || | | | |||||| | ||||| Sbjct 12473 AGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCC-CTCGGTAACGAGAAGTAC 12531 Query 269236 TACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAAC 269295 ||||| |||| || || |||| || ||||| || || || | ||||||||| ||| Sbjct 12532 TACAAGTCGACCAACCCATTCGATTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAAC 12591 Query 269296 TTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG 269340 |||||||| ||||| ||| |||||| ||| ||||||| ||| Sbjct 12592 TTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGGTGTCATG 12636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179611671811706