Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq9 109 5e-19
seq2304 93.3 4e-14
seq50 93.3 4e-14
>seq9
Length=89190
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| || || | |||| || || || || || ||||||||||| |
Sbjct 17897 ACCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 17956
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || || |||||||||||||| | || || ||||||||||| || ||
Sbjct 17957 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 18016
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||||| || || || || || || ||| ||| || | ||||| | |||||
Sbjct 18017 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCAC 18076
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||| |||| || || ||||| ||||||||
Sbjct 18077 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18124
>seq2304
Length=1284
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| ||| || || || |||||||| || ||| || | | | ||
Sbjct 306 AGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCCGAGCGTCCTCCCATCC 247
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || |||| || ||||||||||| || || || || || || |||
Sbjct 246 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 187
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409
|| || || ||| || || | |||| ||| || || || || | || | ||
Sbjct 186 TGGATCTTAGACTTGACGTTATCGATGGTAT--CCGACGACTCAACCTCGAGCGTAATGG 129
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| |||||||| || || |||||||| |||||
Sbjct 128 TCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 95
>seq50
Length=60635
Score = 93.3 bits (102), Expect = 4e-14
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315
|| || |||||||| || | | ||||| | || || ||||||||||| ||| | ||
Sbjct 21179 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 21120
Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375
|| ||||||||||| || |||||||| || || ||||| || || ||| ||| ||
Sbjct 21119 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 21060
Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434
| ||||| || || || || | || | ||||||||| ||||| || || |||||
Sbjct 21059 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 21001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499627143801880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |