Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq442 334 8e-87 >seq442 Length=20621 Score = 334 bits (370), Expect = 8e-87 Identities = 954/1440 (66%), Gaps = 41/1440 (3%) Strand=Plus/Plus Query 93988 GACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTC 94047 |||| |||||| ||||| | |||||||| || || || ||||| | | | || Sbjct 17127 GACACACTCAAGACTTGTGCCATGATCTCAAAGACTGCTGGAGGTATCGGATTGAATATC 17186 Query 94048 CACGACGTA--CGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCC 94105 ||| |||| ||||||| ||| | ||||| ||||||||| || | ||| |||||| Sbjct 17187 CAC--CGTATCCGTGCCACTGGTGCATACATTGCCGGTACCAACGGAAACTCGAACGGCA 17244 Query 94106 TCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGA 94165 | |||||||||||||| || ||||||||| | || | ||||| ||||| ||||| | Sbjct 17245 TTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGGTACGTTGACCAAGGTGGCAACA 17304 Query 94166 GGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCA 94225 | | ||| ||||||| |||| | ||||| ||||||||||| || | ||| Sbjct 17305 AGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGGCACGCGGATGTCTTTGAGTTCC 17364 Query 94226 TCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTC 94285 | ||| || ||||||||||||| || || | | ||| | ||| | |||||||||| Sbjct 17365 TGGACTTGAGAAAGAACCACGGTAAGGAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTC 17424 Query 94286 TCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTT 94345 ||||| | || || || || ||||| || |||||||| ||| || ||||| || | | Sbjct 17425 TCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAGAACGGCGACTGGACCCTCATGT 17484 Query 94346 GTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGG-ATCGCGTTTTGAAGACTTGTAT 94404 | ||||| ||||| || ||| || | || |||| || || | | || | | | Sbjct 17485 GCCCCAACGAATGCCCTGGATTGGCAGATGTTTACGGCGACGAG-CTCGAGGCGCTCGAC 17543 Query 94405 GCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGAT 94464 | | ||||| | |||| |||| | ||| ||| | || |||||| ||| | Sbjct 17544 GAGGGCTACGAGAAGGAGGGTAAGGGTCGCAAGACTATCAAGGCCCAGAAGCTTTGGTAC 17603 Query 94465 CAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTC 94524 || | || ||| ||||| || | || | ||| |||| |||||| || | Sbjct 17604 TCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTTTCATGTTGTACAAGGATGCTTGC 17663 Query 94525 AACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAG 94584 ||| |||| ||||||| || ||||||| ||| ||||| || |||||||| ||| Sbjct 17664 AACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCCGCAGCTCCAACCTGTGCACAGAG 17723 Query 94585 ATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTG 94644 || |||||||| || |||| || ||| | || ||||||||| ||| ||| | |||| Sbjct 17724 ATCGTCGAGTACTCTGCTCCAGATGAGGTGGCCGTGTGTAACTTGGCGTCCCTTGCCCTG 17783 Query 94645 TCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTG 94704 | || | || || ||| | | ||| | ||| | ||| | || ||||| Sbjct 17784 CCAACGTATGT-TGACATGGCCA-ACGGC-ACT------TACGACTTCCAGAAGCTTCAC 17834 Query 94705 AACTTCGCGGGAAGGATG--GTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACC 94762 | || | ||| || ||| |||| |||||| | | || || |||| ||||| Sbjct 17835 GAGGTCAC--ACAGGTTGTCGTCAAGAACTTGAACAAGATCATTGATGTCAACTACTACC 17892 Query 94763 CCGTCCCGGAGGCGGAGAACTCA--AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCA 94820 ||||||||||||| ||| || ||| | || |||| | | | | || ||||| Sbjct 17893 CCGTCCCGGAGGC--CAAACGCAGCAACTTCCGTCACAGGCCAGTTGCCGTTGGTGTCCA 17950 Query 94821 GGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGG 94880 |||| | || || || | || | || || |||| ||| ||| ||| || | | Sbjct 17951 GGGTCTTGCTGATGCATTCCTGGCTCTCCGCCTTCCCTTCGATTCTCCCGAGGC--CAAG 18008 Query 94881 TT--TGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCA- 94937 || | || | | || ||||||| ||| || |||| ||| ||| ||||| | Sbjct 18009 TTCCTCAACTCCCAGATCTTCGAAACCATCTACCACGGTGCCTTGACTGCCTCCGTGGAG 18068 Query 94938 CTTGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGG 94997 || | |||||| ||||| | |||| | | | ||||| || || |||| Sbjct 18069 CTGGCCCAGAT-TCACGGC---ACGTACGAGACCTACGAGGGATCCCCAGTGTCCAAGGG 18124 Query 94998 CATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCT 95057 | || | |||| | ||||| || | || | | |||| |||||||| |||| Sbjct 18125 TGAGCTCCAATACGACATGTGGGGCGTTACTCCTACCGACCTGTGGGACTGGGACTCTCT 18184 Query 95058 --ACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCC 95115 | || | || | | | |||||||| ||| | ||||| || || ||||||||| Sbjct 18185 CAAGGCCCAGA--TCAAGCAGCACGGTGTCCGCAACTCCCTGCTCGTCGCACCCATGCCC 18242 Query 95116 ACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAAC 95175 || |||||||| | |||||||| ||| |||||||| ||||| || | |||||| ||| Sbjct 18243 ACTGCCTCCACCTCCCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCATACACCTCGAAC 18302 Query 95176 GTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGG 95235 | ||| | || || || || || || |||| ||| ||||| | || | Sbjct 18303 ATCTACTCGCGTCGTGTCCTGGCTGGCGAGTTCCAAGTCGTCAACCCCTGGTTGCTCAAG 18362 Query 95236 GACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGC-GCCA 95293 ||||| | || | ||||| | ||| ||| || || |||||| | | ||| | | Sbjct 18363 GACCTGGTCGAC-ATGGGTCTCTGGTCCGACCAGATCGAGAACC-GCATCATCGCAGACG 18420 Query 95294 ACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCG 95353 ||||||| ||||||||||||| | || || | ||||||||||| ||||||||||||| Sbjct 18421 GCGGCTCCATCCAGAACATCCCCAACATCCCCGCCGACATCAAGGCCCTCTACAAGACCG 18480 Query 95354 TGTGGGAGATCCCGCAGCGCGTGATACTCGA-CCACGCGGCCGCCCGCGGGCCCTTCATC 95412 | ||||||||| ||||| || || |||| | || |||| |||||| |||||||| Sbjct 18481 TCTGGGAGATCTCGCAGGGCACCATCGTCGAGACGAGCCGCCGACCGCGGTGCCTTCATC 18540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494705717718920