Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq335 246 3e-60
seq9 114 1e-20
seq2304 109 5e-19
seq50 102 8e-17
>seq335
Length=25434
Score = 246 bits (272), Expect = 3e-60
Identities = 578/862 (67%), Gaps = 23/862 (3%)
Strand=Plus/Minus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| ||||| || ||| | || ||||| || || || || ||||| |
Sbjct 12636 CATGACACCAGTCTTTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGC 12577
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707
|| ||| ||| | ||| ||||| || ||||||| | ||||||| ||| | | ||
Sbjct 12576 CAGGGAGATGTTCTCCATGAAATCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACC 12517
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767
|| || || |||||||||||||| |||||||| ||||||||| ||| | |
Sbjct 12516 GA---GGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 12460
Query 132768 ATTAAGTCCCAGCAGACGCACCGGCA-GCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826
|| | || ||||| ||||| || | | || || || | || |||||||||| ||
Sbjct 12459 GTTCATGCCGAGCAG-CGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGCTGA 12401
Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886
| || ||||| | || || ||| | | ||| || || || | || ||
Sbjct 12400 CAGCCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGA 12341
Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946
| | | ||| || |||||| || | ||||| || | ||| ||||| ||||| ||
Sbjct 12340 AGAGGAGGCAGGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGA 12281
Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006
| |||| ||| | ||||||||| || || |||||||| || |||| |||||| ||| |
Sbjct 12280 AGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGG 12221
Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066
| ||||||| ||||| || || ||||| || || || |||| | || || | || |
Sbjct 12220 AGAAGAAGATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCT 12161
Query 133067 TG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125
| || | |||||| | | ||||| |||||||| | |||| ||| || || || |||
Sbjct 12160 TATCTTG-GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCG 12102
Query 133126 ATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAA-CGC----ACGTAGGTGTCGATGA 133180
||||| || || | || | || || ||| | | | ||| ||||||||||
Sbjct 12101 ATGGCATTGAAGA---GGTATGTCCGTT--GAGCCTGCTCCTTGATGTATGTGTCGATGA 12047
Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240
|| || || | || | ||| | |||||| || |||||| || ||||| ||||| |
Sbjct 12046 GGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGC 11987
Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300
| || || | ||| || || ||| ||||||| || || |||||||| || |
Sbjct 11986 GGGCTTCTGGGATCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTC 11927
Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA 133360
|||| |||||||| || || || || || |||||| | |||||| | || || |
Sbjct 11926 CGTCAGACGCGGCGAAGAAAGCGAGAACATGGGAGATGAAGTAGCGCTCATCATCATTGA 11867
Query 133361 AGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACG 133417
||| | ||||||| | ||||||||| || || | |||||| | ||||| || |
Sbjct 11866 GGCGATTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAG 11807
Query 133418 ACGCCTCGGCTTTTTTGTACAT 133439
| || || || || ||||||||
Sbjct 11806 ATGCTTCCGCCTTCTTGTACAT 11785
>seq9
Length=89190
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || |||||||| || |||||| | || || ||| | ||
Sbjct 18124 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 18065
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | || || |||| ||||| |||||||||||| | |||||
Sbjct 18064 GATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 18005
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| ||||| || || | |||||||| || ||||||
Sbjct 18004 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAAC 17945
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
||||| ||||| | || || || ||||| |||
Sbjct 17944 ATCCAGAAGGAGTCCACCCTTCACTTGGTCCTG 17912
>seq2304
Length=1284
Score = 109 bits (120), Expect = 5e-19
Identities = 166/231 (72%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || || || ||||| || |||| || ||| | |
Sbjct 95 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACGCTCGAGGTTGAGTCGTCG 154
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || || |||| || || ||||| || || | |||||
Sbjct 155 GATACCATCGATAACG-TCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCA 213
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || |||| ||||||||| ||||| || || | | | || ||| |||||||||
Sbjct 214 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGGAGGACGCTCGGCGACTACAA 273
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| ||||| ||| ||||| || |||||||| ||| | | |||||||
Sbjct 274 CATCCAGAAGGAGAGC-ACGCTTCACTTGGTGCTCCGTCTTCGTGGCGGCC 323
>seq50
Length=60635
Score = 102 bits (112), Expect = 8e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || | |||||||| ||||||||| | || |||||| || |||| | |
Sbjct 21001 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 21060
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| |||||||||||| | ||||| ||||| ||
Sbjct 21061 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTG 21120
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | || ||||| ||||| || || | ||||| || ||||||||||||||| |||
Sbjct 21121 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 21180
Query 38433 G 38433
|
Sbjct 21181 G 21181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500155125143680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |