Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq987 241 2e-58 seq154 93.3 5e-14 seq258 82.4 1e-10 >seq987 Length=8956 Score = 241 bits (266), Expect = 2e-58 Identities = 485/713 (68%), Gaps = 11/713 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || || || | ||||| || |||||||| Sbjct 6255 TCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCC 6314 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | || ||||| || || |||||||| || || || || || ||| Sbjct 6315 TCCTCGATGGTGAGGAGAGAGACATCGAAAGTTCCACCACCAAGATCGAAGATCAGGACG 6374 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || ||||| || |||||||| || || || || || || || || Sbjct 6375 TTGCGCTCACCCTCGACCTTCTTGTCAAGACCGTAAGCAATGGCAGCGGCGGTAGGCTCG 6434 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| ||| ||| || || ||||| | ||||| || || || || || Sbjct 6435 TTGATGATACGGAGAACGTTGAGTCCGGCAATGAGACCGGCATCCTTGGTAGCCTGACGC 6494 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| ||||| || ||||| || || || |||| |||| | ||||| Sbjct 6495 TGGGAGTCGTTGAAGTAAGCTGGGACGGTGACAACGGCGTTGTTGACGGTTCCGCCGAGG 6554 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || || | || ||| ||| || | ||| || || ||||| || | | Sbjct 6555 TAGGCCTCAGCAGTCTCGCGCATCTTGACGAGGATCATGGAGGAGATCTCCTCGGGTGTG 6614 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTT--CAATCATGGGTTTATCCGCAGCACCGG 7874 || | || || || || || || || || | ||| | ||| || |||| | | Sbjct 6615 AAGTCCTTGGTCTCGCCCTTGAACTCGACCTGGCAAAC-TGGCTTG--CCGC--CCTTGT 6669 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 ||| | ||| | | | | ||||| ||| | ||||||| ||| | ||||| | Sbjct 6670 CGATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCGTCGGCGAACTTGC 6729 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 ||||| |||||||| || ||||| || ||||| | ||||||||||| |||||||| Sbjct 6730 GACCGATCAGACGCTTGGCGTCAAAGACGGTGTTGGTTGGGTTCATGGCGACTTGGTTCT 6789 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || || || ||||| ||||| || | || || || || ||| |||| ||||| | Sbjct 6790 TGGCGGCATCACCGATCAGACGCTC---GGTGTCGGTGAAGGCAACGAACGAGGGGGTTG 6846 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | || || || |||||||| ||||| || || | |||||| | | ||| || |||| Sbjct 6847 TGCGGTTGCCCTGGTCGTTGGCAATGATCTCAATGCGGTCATCTCTGAAGATACCCACGC 6906 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTTATATATT 8167 |||| || || || || ||||| ||||||| |||| | | || || |||||| Sbjct 6907 ACGAGTAGGTGGTACCCAAATCGATACCGA-TGCTGGGGCCAGTTAGTATATT 6958 >seq154 Length=38131 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/190 (71%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| || |||||| || | |||||||| || ||||| |||| || || || | Sbjct 35058 GTGTTCTTTGGGTTCGCAGCAGCCTGGTTCTTGGCTGCGTCTCCGACCAGGCGCTCCTCC 34999 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | | || || |||||||| |||||||| ||| | ||||||||||| | | ||| Sbjct 34998 T---CGGTGAATGCGACGTAAGATGGGGTAATTCTGTGACCTTGGTCGTTGACGAGAATC 34942 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143 || || | |||| ||| || ||||| || || || || ||||| |||||||||||| Sbjct 34941 TCGACCTTGCCGTTCTGCATCACACCGACACAAGAGTAGGTGGTTCCCAAATCAATACCG 34882 Query 8144 ATTGCTTGAG 8153 || || ||| Sbjct 34881 ATAACTGGAG 34872 >seq258 Length=30037 Score = 82.4 bits (90), Expect = 1e-10 Identities = 108/148 (73%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 ||| || |||||||| || | ||| || || || || || || | | ||| ||| ||| Sbjct 24337 CTTCTCAAGACCGTATGCAAGAGCAGCGGCGGTAGGCTCGTTGACGACACGGAGAACGTT 24278 Query 7657 CAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 |||||||||||| ||| | || || || || ||||| || || || ||||| ||||| Sbjct 24277 CAGGCCAGCAAT--TTGACCGGCGTCCTTGGTGGCTTGGCGCTGGGAGTCGTTGAAGTAA 24220 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGA 7742 || ||||| || || || |||| | ||| Sbjct 24219 GCTGGGACAGTGACAACGGCGTTCTTGA 24192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635110355994680