Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq9 100 2e-16
seq50 82.4 5e-11
>seq9
Length=89190
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826
|||| |||||||||| ||| || ||||| ||||| || ||||||||| | || ||
Sbjct 17910 CTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCA 17969
Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886
|| || ||||| || ||||| || || || || |||||||| | || | |||||||||
Sbjct 17970 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 18029
Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGT 34942
|| ||||| ||||| || | ||||| || | ||| || || | |||
Sbjct 18030 TCCTGGATCTTGGACTTGAC--AT--TGTCGATAGTATCGGACGACTCCACCTCAAGGGT 18085
Query 34943 TATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || ||||| || |||||||| ||||| |||||
Sbjct 18086 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18124
>seq50
Length=60635
Score = 82.4 bits (90), Expect = 5e-11
Identities = 130/184 (71%), Gaps = 8/184 (4%)
Strand=Plus/Minus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
||||| ||||| ||||| ||||| | ||| |||| || ||||| || || ||||| ||
Sbjct 21179 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 21120
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
|| || |||||||| | || | ||||||||||| |||||| ||||| || |
Sbjct 21119 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGAC--AT--T 21064
Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
||||| || || ||| || || | ||| ||||| || ||||| | ||||| ||
Sbjct 21063 GTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 21004
Query 34970 AAAG 34973
|||
Sbjct 21003 GAAG 21000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324622415053656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |