Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq9 100 2e-16 seq50 82.4 5e-11 >seq9 Length=89190 Score = 100 bits (110), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||| |||||||||| ||| || ||||| ||||| || ||||||||| | || || Sbjct 17910 CTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCA 17969 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || ||||| || ||||| || || || || |||||||| | || | ||||||||| Sbjct 17970 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 18029 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGT 34942 || ||||| ||||| || | ||||| || | ||| || || | ||| Sbjct 18030 TCCTGGATCTTGGACTTGAC--AT--TGTCGATAGTATCGGACGACTCCACCTCAAGGGT 18085 Query 34943 TATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || ||||| || |||||||| ||||| ||||| Sbjct 18086 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18124 >seq50 Length=60635 Score = 82.4 bits (90), Expect = 5e-11 Identities = 130/184 (71%), Gaps = 8/184 (4%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| ||||| | ||| |||| || ||||| || || ||||| || Sbjct 21179 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 21120 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || |||||||| | || | ||||||||||| |||||| ||||| || | Sbjct 21119 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGAC--AT--T 21064 Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 ||||| || || ||| || || | ||| ||||| || ||||| | ||||| || Sbjct 21063 GTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 21004 Query 34970 AAAG 34973 ||| Sbjct 21003 GAAG 21000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324622415053656