Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq1134 86.0 8e-12 >seq1134 Length=7297 Score = 86.0 bits (94), Expect = 8e-12 Identities = 200/301 (66%), Gaps = 3/301 (1%) Strand=Plus/Minus Query 197027 CCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCGGGAT 197086 |||| ||||| |||||||| ||||| || || | | ||||| || | || ||||| Sbjct 6567 CCTCTTCGCTGAAGCCCGTGCCGATGTTGCAGACTGTCTCGTAGCGCTCGGTGGAGGGAT 6508 Query 197087 TGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGC 197146 |||||||||| |||||||||||||| || | |||| ||| ||| |||| | | Sbjct 6507 TGTAACAGGCTAGTAAGAAAGCGCCATACACGCTGGTTCGCTTCCCCTTTCCGTGGTAAG 6448 Query 197147 CTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTT 197206 | || | || || || || || | ||||| | || | | ||| || ||||| | | Sbjct 6447 CGCCAAGGACGACGAGGTCGAGCGCGTCGCCGATGCCGGCGAGGTAGTCCTTCTTGATCT 6388 Query 197207 TGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTA---GGTTGCGTTTACGTCCAGGGTCT 197263 |||||||| | | || | |||| |||||| | || |||| || ||| Sbjct 6387 TGAGCCAGTTGCGGGAGCGCTTGCTGGGCTCGTAGCGGAACTCGACGCCGTCGAGCATCT 6328 Query 197264 TGATCATCAATCCCTCGCAATCTTCCTTCACGGCCTTGTTCATGAAAGTTTGAATGTCTT 197323 ||| ||| | |||||||| |||| |||| | || | ||| ||||| ||||| | Sbjct 6327 TGACCATGAGGCCCTCGCAGGAGGCCTTGACGGAGTCGTCGAGGAAGGTTTGGATGTCGT 6268 Query 197324 C 197324 | Sbjct 6267 C 6267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676705686067760