Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq442 223 6e-53 seq335 206 5e-48 >seq442 Length=20621 Score = 223 bits (246), Expect = 6e-53 Identities = 805/1232 (65%), Gaps = 63/1232 (5%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 |||| |||| ||||||||||||| || |||||| |||||| ||||||||||||| Sbjct 18055 GTCAAGGCACCGTGGTAGATGGTTTCGAAGATCTGGGAGTTGAGGAACTTGGCCTCGGGA 17996 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 ||| |||||| | || || | | || | || || || ||||| || || | | Sbjct 17995 GAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACACCAACGGCA 17936 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCG-CTTCTGGCACGGGATAAAAGTTGACGTC 221595 | |||||||| | |||| ||| | | || || ||||| || ||||||| || Sbjct 17935 ACTGGCCTGTGACGGAAGTTGCT-GCGTTTGGCCTCCGGGACGGGGTAGTAGTTGACATC 17877 Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACC------ACCTCGGTCAGCTTCTG 221649 || | ||||| | |||| ||| ||| |||| |||||| |||||||| Sbjct 17876 AATGATCTTGTTCAAGTTCT---TGACGAC---AACCTGTGTGACCTCGTGAAGCTTCTG 17823 Query 221650 GTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTT--AGGGCA 221707 | | | | | | ||||| | | | || ||| | |||| |||||| Sbjct 17822 GAAGTCGTA-----AGT----GCCGTTGGCCATG---TCAACATA--CGTTGGCAGGGCA 17777 Query 221708 ACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTG 221765 | | |||| |||||||||||||||||| || || | | |||| | |||||||| Sbjct 17776 AGGGACGCCAAGTTACACACGGCCACCTCATC--TGGAGCAGAGTACTCGACGATCTCTG 17719 Query 221766 TACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAG 221825 | || |||||| || |||||| || |||| || || || |||||| ||| || Sbjct 17718 TGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAG 17659 Query 221826 CGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCC 221885 | |||||||| | ||| || || || ||||| ||||| | | ||||| || || Sbjct 17658 CATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACC 17599 Query 221886 AGAGTTCTCTGGCGCTC-ACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTA 221944 | || | ||||| || | ||| | | |||||| ||| || || || Sbjct 17598 AAAGCT-TCTGGGCCTTGATAGTCTTGCGACCCTTACCCTC---CTTCTCGTAGCCCTCG 17543 Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACAC 222004 | |||| || | || || ||||| | || ||| || || || | ||| ||| Sbjct 17542 TCGAGCGCCTCGAGCTCGTCGCCGTAAACATCTGCCAATCCAGGGCATTCGTTGGGGCAC 17483 Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064 || || |||||| ||| | | ||| | || ||||||||| ||||| ||||| || Sbjct 17482 ATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGA 17423 Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124 || | || | || | || || |||||| |||| ||| || |||| |||| Sbjct 17422 GCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTACCGTGGTTCTTTCTCAAGTCCAGG 17363 Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184 |||||||| | || |||||||| ||||| | |||| ||| | ||| || || |||||| Sbjct 17362 AACTCAAAGACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTG 17303 Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243 |||||||| || || || ||| | | | | |||||| | ||| || | || || | Sbjct 17302 TTGCCACCTTGGTCAACGTACCT-TGCGGTGTTGTTGAACACGCGGAGCATAGGGACAAT 17244 Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TG 222301 ||||| || |||||||| || |||||| ||||| ||| | || ||| || Sbjct 17243 GCCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCAC---GGATACGGTG 17187 Query 222302 G-CAGACATGCCGATACCACCGGC-GTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGT 222359 | | || |||||||| || || || ||| ||||||||||| || ||||||| |||| Sbjct 17186 GATATTCAATCCGATACCTCCAGCAGTCTTT-GAGATCATGGCACAAGTCTTGAGTGTGT 17128 Query 222360 CCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG 222419 | ||| ||||| ||| |||||||| | || | || || || ||||| | ||| | Sbjct 17127 CATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGG 17068 Query 222420 -ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478 | ||||| | || || || || || || || |||||||| ||||| |||| Sbjct 17067 CCTGTGGTGTACCA-GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGAC 17009 Query 222479 ATCAGATCGTACGTCTCTA-CGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCA 222537 || || | ||| ||||| | | || | | || | || |||||||| || || Sbjct 17008 ATGAGGTTGTATGTCTCGATTGTCT-TCTCAATATCCTCACCGTGAATGCCCACCGCAAC 16950 Query 222538 TCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTG-----GAGCTGGAGAGCAGG 222592 | ||| ||||| ||| ||||||| ||| | ||||| || ||||| ||| Sbjct 16949 ACGCATAATCATGTGCTGTGGCCTCT---CAGCAACCTTGCCATCAAGTCGGAGA--AGG 16895 Query 222593 TACGATTTTTCCAGAGTCTTGAACCCAAAGTA 222624 || ||| ||||| |||||||| || ||||| Sbjct 16894 TAGGATCGCTCCAGGGTCTTGAAGCCGAAGTA 16863 Score = 86.0 bits (94), Expect = 1e-11 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 221066 ATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCACT 221125 |||| ||| | ||| |||||| | || |||| |||||| || ||| || ||| Sbjct 18397 ATCTGGTCGGACCAGAGACCCATGTCGACCAGGTCCTTGAGCAACCAGGGGTTGACGACT 18338 Query 221126 TGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCTC 221185 ||||| || || | || || | | | ||| | ||| || ||| | || |||| || | Sbjct 18337 TGGAACTCGCCAGCCAGGACACGACGCGAGTAGATGTTCGAGGTGTATGGCTCGAAGCAC 18278 Query 221186 TCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACTG 221245 |||||| ||| |||||||| | ||| ||| |||||||||||||| || ||||| | Sbjct 18277 TCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGCATGGGTGCGACGAGCAGGGAG 18218 Query 221246 TTGCG 221250 ||||| Sbjct 18217 TTGCG 18213 >seq335 Length=25434 Score = 206 bits (228), Expect = 5e-48 Identities = 562/860 (65%), Gaps = 16/860 (2%) Strand=Plus/Plus Query 25471 AAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATT 25530 ||| | || ||| |||||||||||||||| || || |||||| || || |||||| Sbjct 11770 AAATAGATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATT 11829 Query 25531 GATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTC 25590 ||||| |||||||| | ||| |||| || || ||| || || ||| | || Sbjct 11830 GATCTCTCCAAGGACCTTCACGACTGGAACAATCGCCTCAATGATGATGAGCGCTACTTC 11889 Query 25591 AAGTACG-TGTTG--GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGC 25647 | | | |||| || ||||| || || ||||| || || || |||||||| || | Sbjct 11890 ATCTCCCATGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTC 11949 Query 25648 GAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATG 25707 ||| | |||| ||| || || ||| | || ||| || |||||||||||||| || Sbjct 11950 GAGCGCTTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATC 12009 Query 25708 GCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACA 25764 ||||| || | ||| | ||| || || || || || || ||||| | Sbjct 12010 ATGATCGAGAACATTCACGCCGAGACATACTCC---CTCCTCATCGACACATACATCAAG 12066 Query 25765 GACGTCGC-CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAG 25823 || || | | || || || || |||||||||| ||| || ||||||||| Sbjct 12067 GAGCAGGCTCAACGGACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAA 12125 Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 |||||| ||||| | | ||||||| | || |||| |||| |||| || Sbjct 12126 GAAGGCCGACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCTACCTTTGCTCAGCGTCT 12185 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943 || ||||| |||||||| ||||| ||||| ||| ||| || || || |||| ||||| Sbjct 12186 CGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTG 12245 Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||||||| || || |||| | || ||| ||| || |||||||||||| | | || Sbjct 12246 GCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGA 12305 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC 26063 ||||||||||||| || || |||||||| |||| | | |||| | ||| || Sbjct 12306 TGAGGGTCTCCACACCGACTTCGCCTGCCTCCTCTTCTC---CCACCTTAGACAC-CGCC 12361 Query 26064 TTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTC 26122 |||| || ||||| | |||| | |||||||| |||||| | ||||| Sbjct 12362 CAAGCAAGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCT 12421 Query 26123 NNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACA 26182 | ||||||||| || | |||| ||||||| Sbjct 12422 TGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACA 12481 Query 26183 TTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGC 26242 |||||| || |||||| |||||| | || || || | ||||| || Sbjct 12482 TTGAGTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGA 12541 Query 26243 CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAA 26302 | ||||| ||||| || ||||| ||||| || ||| ||| |||||||||||||| || | Sbjct 12542 CCAACCCATTCGATTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAGA 12601 Query 26303 AGAGGGTCGGCGACTATCAA 26322 || | |||| |||||| ||| Sbjct 12602 AGCGCGTCGCCGACTACCAA 12621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928811976946880