Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq691 134 2e-25 seq335 131 2e-24 seq442 123 3e-22 seq11 95.1 1e-13 >seq691 Length=13955 Score = 134 bits (148), Expect = 2e-25 Identities = 141/183 (77%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 1592119 CGACATCTCGCCGTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGT 1592177 ||||||| | ||||||| || |||| ||| | ||||| ||| | ||||| ||| Sbjct 12120 CGACATCGAGGAGTGGGACCAGAAGTTCATGCAA-GTCGACCAGGAGATGCTCTTCGAGA 12062 Query 1592178 TGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTG 1592237 | ||||||||| |||||||||| ||||||||||| || |||||| | ||||||||| | | Sbjct 12061 TCATCCTCGCCTCCAACTACCTTGACATCAAGCCCCTCCTCGATGTGGGGTGCAAGACCG 12002 Query 1592238 TGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGT 1592297 |||| || ||||| ||||| ||| || ||||||||| | ||||| ||||| || | | Sbjct 12001 TGGCGAATATGATTAAGGGGAAGAGCCCGGAGGAGATCAGGAAGACGTTTAATATTACGA 11942 Query 1592298 ACG 1592300 ||| Sbjct 11941 ACG 11939 >seq335 Length=25434 Score = 131 bits (144), Expect = 2e-24 Identities = 186/256 (73%), Gaps = 7/256 (3%) Strand=Plus/Minus Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCC 869269 |||| ||||| | ||||||||| |||||||||||||| || |||| | ||| ||| Sbjct 12281 AAGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCG 12222 Query 869270 GAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGG 869329 ||||| ||||| ||||| || || || ||| | | ||| |||| |||||| || || Sbjct 12221 GAGAAGAAGATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGAGCAAAG--GTAGAAT 12164 Query 869330 CCCT-CCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGT 869388 || | |||| ||||||| | | |||||||||||||| ||| | | | || | || Sbjct 12163 CCTTATCTTG--GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGT 12106 Query 869389 GTCGATGGCGCGAAAGAGGT-GGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCA 869447 |||||||| ||||||| |||| || ||| | ||||||| || |||||||| | Sbjct 12105 CTCGATGGCATTGAAGAGGTATGTCC-GTTGAGCCTGCTCCTTGATGTATGTGTCGATGA 12047 Query 869448 GGAGCGAATAGGTCTC 869463 |||| || || ||||| Sbjct 12046 GGAGGGAGTATGTCTC 12031 Score = 129 bits (142), Expect = 7e-24 Identities = 164/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| ||| | |||||| |||||| ||||||||||| || | || ||||| |||||| Sbjct 12618 GTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCAT 12559 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||||| || |||||||| ||| ||| ||||| || ||||| | Sbjct 12558 GAAATCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACCGAGGGAGAGCAGCAGCCT 12499 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||||||||| ||||| ||||| || ||| | | |||||||||||||| ||||| Sbjct 12498 GTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACA 12439 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924 || || | ||| ||| ||||||| |||||| ||| |||||| Sbjct 12438 GGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGCTGACAGCCTCG 12393 Score = 87.8 bits (96), Expect = 2e-11 Identities = 170/249 (68%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 869635 GTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGAC 869694 ||| ||||||||||| ||| ||||| ||||| ||| | | |||| | ||||| Sbjct 12027 GTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATCTGGAC 11968 Query 869695 CTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAA 869754 ||| | |||| || || ||||||||| || || ||||| |||||||| || Sbjct 11967 CTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAA 11908 Query 869755 AGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGA--CACCCAGTGGAC 869811 ||| || || || ||| |||| |||||| || || ||| |||| ||||| | Sbjct 11907 AGCGAGAACATGGGAGATGAAGTAGCGCTCATCATCATTGAGGCGATTGTTCCAGTCGTG 11848 Query 869812 GGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 ||| | ||| || | |||||| || ||||||| || || || ||||| ||||| Sbjct 11847 AAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGATGCTTCCGCCTTCTTGTA 11788 Query 869872 CATCTCCCA 869880 ||||| ||| Sbjct 11787 CATCTGCCA 11779 >seq442 Length=20621 Score = 123 bits (136), Expect = 3e-22 Identities = 362/546 (66%), Gaps = 29/546 (5%) Strand=Plus/Minus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCC 1627040 ||| |||||||| || ||||||| | ||| ||||| | ||||||| || |||||||| || Sbjct 18696 CTGCTCGACGGTGAATTGGATGGGGGCGGAGGCGGCCATGGTGCGGAGGTAGTACATTCC 18637 Query 1627041 GGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGC---GT 1627097 ||||||||||||| | ||| | |||||| || ||||| || | | || Sbjct 18636 GGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGATGTGAT---CTTGCCCATTGT 18580 Query 1627098 CGCGTCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGC 1627157 | ||| || | |||||| |||||| || |||| ||| |||| ||||| Sbjct 18579 TGGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGATGAAGGCACCGCGGTCGGC 18520 Query 1627158 ----CGCCATGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCT 1627213 || | | |||||||| || | | | |||||| ||||||||| ||| ||||| Sbjct 18519 GGCTCGTCTCGACGATGGTGCCC---TGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCT 18463 Query 1627214 TGAGGTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGA 1627273 ||| ||| ||||| | || | | | ||| | |||||| | |||| || Sbjct 18462 TGATGTC-GGCGG-----GGATGTTGGGGATGTTCTGGATGGAGCCGCCGTCTGCGATGA 18409 Query 1627274 -GCCTGTCGCGAAAGTCGGG--CGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGT 1627330 || || ||| || || | ||| || || | | |||| ||||| || Sbjct 18408 TGCGGTTCTCGA---TCTGGTCGGACCAGAGACCCATGTCGACCAGGTCCTTGAGCAACC 18352 Query 1627331 GGCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTG- 1627389 | ||||||| || || ||||| | || || || |||| ||||||||| |||| Sbjct 18351 AGGGGTTGACGACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAGATGTTCGAGGTGT 18292 Query 1627390 ATGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGC 1627449 ||| |||| | |||| || ||| |||||||| || || | ||| ||||||||| | Sbjct 18291 ATG-GCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGCATGGGT 18233 Query 1627450 GCCACGAGGAGCGAGTTGCGCAGGCCGTGCTG-TCGAACTAGCGCGCGCAGCGCGTCCCA 1627508 || ||||| || |||||||| | |||||||| | || || | || || | |||||| Sbjct 18232 GCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCT-GGGCCTTGAGAGAGTCCCA 18174 Query 1627509 GTCCCA 1627514 |||||| Sbjct 18173 GTCCCA 18168 Score = 95.1 bits (104), Expect = 1e-13 Identities = 175/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| ||||| | || |||| ||| || ||||||||||| || || | |||||| || Sbjct 17293 TGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAG 17234 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | |||||||| || || | ||| || || | ||| || | ||| || ||| Sbjct 17233 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCG 17174 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || || || || | ||| ||||| | || || ||||| ||||| ||||| ||||| Sbjct 17173 ATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCA 17114 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || || |||||||||| || | ||||| ||||| || | || | || || Sbjct 17113 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTGGTGTACCA 17054 Query 1630306 GCGTTGAAGAGCGTGGG 1630322 || |||||||| || || Sbjct 17053 GCATTGAAGAGTGTTGG 17037 >seq11 Length=86845 Score = 95.1 bits (104), Expect = 1e-13 Identities = 118/158 (75%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTG-CCGGCAGGCCTCGGCGA 19105 ||||||||||| ||||| || || ||||| | ||| | || || ||| |||||| Sbjct 34079 GACAGCATCGGTGGCACCGTCACCTGCGTCATCAGGAACTTCTCCAGCGGGC-TCGGCGT 34137 Query 19106 GCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCAC 19165 || ||| | |||||| |||||| |||||||||||||||||| ||||| ||||| Sbjct 34138 GCACAGCTACGTCAAGATGGAGGCCATGCTCGCCCACGCCATGCTCAGCATCCCCGCCAC 34197 Query 19166 CAAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 |||||| || ||||| ||| ||| || |||| |||| Sbjct 34198 CAAGGGTTTTGAGATCGGCTCCGGCTTCGGCGGCTGCG 34235 Score = 93.3 bits (102), Expect = 5e-13 Identities = 165/238 (69%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 18093 CACCTTTGGCGAGTCGCACGGGGCGGGCG-TCGGCTGCATCATCGACGGCGTGCCGCCGT 18151 || || |||||||||||| | || || | || |||||| |||| ||| || || Sbjct 33450 CAGCTATGGCGAGTCGCATTGT-CGCTCGGTGGGATGCATCGTCGATGGCTGCCCCCCAG 33508 Query 18152 GCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG 18211 | ||| || |||| ||||| |||||||||||| || || |||||||| |||||| Sbjct 33509 GAATGGAGCTCACCGAAGCCGATATCCAGCCTCAGATGACCCGTCGCCGACCCGGCCAGA 33568 Query 18212 GCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGA 18271 |||| || | || || ||| | ||| || | ||| ||||| || ||||| ||| Sbjct 33569 GCGCCCTGACGACTCCCCGCGATGAGAAGGACCAGGTCGAAATCCACTCTGGCACCGAGT 33628 Query 18272 ACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCC 18329 |||| |||| || || | ||| ||||| | | || ||||| |||||||| || Sbjct 33629 TCGGCGTCACCCTGGGTACCCCCATCGGCATGCTCGTCCGCAACCAGGACCAGCGCCC 33686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106907203141159