Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq335 149 1e-29 seq691 132 8e-25 seq206 98.7 2e-14 seq442 89.7 8e-12 >seq335 Length=25434 Score = 149 bits (164), Expect = 1e-29 Identities = 211/292 (72%), Gaps = 5/292 (2%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 ||||| | ||||||||| |||||||||||||| || |||| ||| ||| ||||| Sbjct 12275 AGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAG 12216 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 ||||| ||||| || || || ||| | ||||| |||| ||||| || | || | | Sbjct 12215 AAGATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGAGCAAA--GGTAGAATCCTTAT 12158 Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATG 794556 | | ||||||| | | ||||| || ||||| ||| | | | || | || |||||| Sbjct 12157 CT-TGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATG 12099 Query 794557 GCGCGAAAGAGGT-GGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGA 794615 || ||||||| |||| | | || | ||||||| ||| |||||||||||||| || Sbjct 12098 GCATTGAAGAGGTATGTCCGT-TGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGA 12040 Query 794616 GTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||| ||||| | ||| ||||| ||||| ||| ||||| || || |||||| Sbjct 12039 GTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAG 11988 Score = 131 bits (144), Expect = 3e-24 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || ||| | |||||| |||||| ||||||||||| || | || ||||| |||||| Sbjct 12617 TAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCATG 12558 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||||| || | ||||| ||||||| ||||| || ||||| | | Sbjct 12557 AAATCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACCGAGGGAGAGCAGCAGCCTG 12498 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 ||||||||||| |||||||| || ||| | | |||||||||||||| ||||| | Sbjct 12497 TCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACAG 12438 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139 || || | ||| | | ||||||| |||||| ||| |||||| | |||| Sbjct 12437 GGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGCTGACAGCCTCGGTAATGA 12386 >seq691 Length=13955 Score = 132 bits (146), Expect = 8e-25 Identities = 109/133 (82%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 ||||| ||| | ||||||||| |||||||||| ||||||||||||||||||||| ||||| Sbjct 12071 CTCTTCGAGATCATCCTCGCCTCCAACTACCTTGACATCAAGCCCCTCCTCGATGTGGGG 12012 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 |||||||||||||| || | || ||||| ||| || ||||| ||| | ||||| ||| Sbjct 12011 TGCAAGACCGTGGCGAATATGATTAAGGGGAAGAGCCCGGAGGAGATCAGGAAGACGTTT 11952 Query 2035749 AACATCAAGTACG 2035761 || || | | ||| Sbjct 11951 AATATTACGAACG 11939 >seq206 Length=33722 Score = 98.7 bits (108), Expect = 2e-14 Identities = 171/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 || |||| || ||||| ||| | | || ||||| ||||||||| || | ||||| | Sbjct 4983 CTCCCGCAAGGACGCCAAAAGCTTGTTATTCTCGACGAGGCCGACAGCATGACGTCTGGT 5042 Query 2019255 GCCCAGCAGGCCCTCCGATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCT 2019313 ||||| || ||||| || ||| |||||||| | ||| | || || || || || | Sbjct 5043 GCCCAACAAGCCCTGCG-TCGCACCATGGAGATCTACTCTTCGACCACCCGCTTCGCATT 5101 Query 2019314 GGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCG 2019373 || ||||| ||| | | | ||||| |||| || ||||||||||||||||| Sbjct 5102 CGCATGCAATCAGTCCAACAAGATTATCGAGCCCCTGCAATCGCGTTGCGCCATCTTGCG 5161 Query 2019374 CTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGA 2019433 || ||| | || || || || || ||| ||| |||| | |||||||||| || || Sbjct 5162 CTATGCAAGGCTAACGGATGCACAAGTCGTGAAGCGCCTGCTCCAGATTATCGAGGCGGA 5221 Query 2019434 AAAGGT 2019439 ||||| Sbjct 5222 GAAGGT 5227 >seq442 Length=20621 Score = 89.7 bits (98), Expect = 8e-12 Identities = 174/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| || || | || |||| ||| || ||||||||||| || |||| |||||| || Sbjct 17293 TGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAG 17234 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | |||||||| || || | ||| || || | ||| || | ||| || ||| Sbjct 17233 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCG 17174 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || || || | ||| ||||| | || || | || || || || ||||| ||||| Sbjct 17173 ATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCA 17114 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || || |||||||||| | || ||||| ||||| || | | | || || Sbjct 17113 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTGGTGTACCA 17054 Query 2073781 GCATTGAAGAGCGTGGG 2073797 ||||||||||| || || Sbjct 17053 GCATTGAAGAGTGTTGG 17037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915945679116053