Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq442 134 1e-26 seq2304 125 7e-24 seq9 122 8e-23 seq50 93.3 4e-14 >seq442 Length=20621 Score = 134 bits (148), Expect = 1e-26 Identities = 797/1265 (63%), Gaps = 39/1265 (3%) Strand=Plus/Minus Query 148116 ATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGC 148175 ||||||||| | |||||||| || |||||| | |||| ||| | |||| ||| Sbjct 18490 ATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATGTTCTGG 18431 Query 148176 ACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCG 148235 | ||||||| || || | || | || || | ||| | | || | ||| Sbjct 18430 ATGGAGCCGCCGTCTGCGATGATGCGGTTCTCGATCTGGTCGGACCAGAGACCCATGTCG 18371 Query 148236 ATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGC 148295 | |||||| | || || | | || || || || |||||||| || || || || ||| Sbjct 18370 ACCAGGTCCTTGAGCAACCAGGGGTTGACGACTTGGAACTCGCCAGCCAGGACACGACGC 18311 Query 148296 AGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTC 148355 || | ||| || | || || || |||||||| ||| | ||||| | ||| Sbjct 18310 GAGTAGATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTG 18251 Query 148356 GTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTG 148415 | || ||||||||| || || ||||| |||||||| | |||| | | || || | | Sbjct 18250 GAGGCAGTGGGCATGGGTGCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGG 18191 Query 148416 CGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGC 148475 ||| |||| |||||||||| || | || || ||| |||||||||||| || Sbjct 18190 GCCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGCCCCACATGTCGTATTGG 18131 Query 148476 AG-AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGC 148534 || || || | |||| | |||||||| | ||||| ||||| | || Sbjct 18130 AGCTCACCCTTGGACACTGGGGAT-CCCTCGTAGGTCTCGTACGTGCCGTGAATCTGGGC 18072 Query 148535 CAGTTCGCAGCTCGC-CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGA 148593 ||| || | || || || || |||| ||| || || ||| || || ||||| Sbjct 18071 CAGCTCCACGGAGGCAGTCAAG-GCACCGTGGTAGATGGTTTCGAAGATCTGGGAGTTGA 18013 Query 148594 GCAGCGCCGCCGACTCG---CTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAA 148650 | | | || |||| ||| | || | || || || || || || |||| Sbjct 18012 GGAACTTGGC---CTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAA 17956 Query 148651 GGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGA 148710 | ||||| || || ||| ||| |||| ||| | |||| | | || | || Sbjct 17955 GACCCTGGACACCAACGGCAACTGGCCTGTGACGGAAGTTGCTGCGTTTGGCCTCCGGGA 17896 Query 148711 GCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTGTAATT 148769 || |||| |||| || ||||||||| ||||| || || || |||| ||| | Sbjct 17895 CGGGGTAGTAGTTGACATCAATGATCTTGTTCAAG-TTCTTGACGACAACCTGTGTGACC 17837 Query 148770 CTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATG----CATCGGTT--CACGGCG 148823 | | ||| | || ||||| || | | | ||| ||| ||| || ||| Sbjct 17836 TCGTGAAGCTTCTGGAAGTCGTAAGTGCCGTTGGCCATGTCAACATACGTTGGCAGGGCA 17777 Query 148824 ATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCG 148883 | || || | || ||||||||| |||||| || || |||||| |||||||| | | Sbjct 17776 AGGGACGCCAAGTTACACACGGCCACCTCATCTGGAGCAGAGTACTCGACGATCTCTGTG 17717 Query 148884 CACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCG 148943 ||||| ||| || ||| || | |||||| || |||||||||| |||||| || Sbjct 17716 CACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCA 17657 Query 148944 TCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGA 149000 |||||||||| |||| | || || || || ||| | || | || | ||| | Sbjct 17656 TCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAA 17597 Query 149001 TGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCG------ACCCTCCTGCTCGTATAAA 149054 || | ||| || |||| | || | ||| |||||||| |||||| Sbjct 17596 ---AGCTTCTGGGC-----CTTGATAGTC-TTGCGACCCTTACCCTCCTTCTCGTAGCCC 17546 Query 149055 GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG 149114 | ||| ||||| | | |||||||| ||| | | || ||||| | || ||| Sbjct 17545 TCGTCGAGCGCCTCGAGCTCGTCGCCGTAAACATCTGCCAATCCAGGGCATTCGTTGGGG 17486 Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174 |||||||| | ||| |||||| | | || |||||||| || ||||| || | |||| Sbjct 17485 CACATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAG 17426 Query 149175 AGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTG 149234 || ||||| | | ||| || || | || || || ||| | || || Sbjct 17425 AGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTACCGTGGTTCTTTCTCAAGTCC 17366 Query 149235 AGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC 149294 || | || | ||||||||||| ||||||| ||| | |||| || || |||| Sbjct 17365 AGGAACTCAAAGACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGC 17306 Query 149295 ---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCA 149351 ||||| || ||||| |||| | | ||||||| ||||| || | |||||| || Sbjct 17305 TTGTTGCCACCTTGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACA 17246 Query 149352 ATGCC 149356 ||||| Sbjct 17245 ATGCC 17241 >seq2304 Length=1284 Score = 125 bits (138), Expect = 7e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 ||| ||||| || ||||| ||||| | ||| | ||||||||||||||||||||| | Sbjct 286 CTCCTTCTGGATGTTGTAGTCGCCGAGCGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAA 227 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||| || ||||||||||| || |||||||| ||||| || |||||| ||||| | Sbjct 226 AATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTAGACTTGACGTT 167 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 || | || || | | ||| || |||| || | ||| || ||||||| || || || Sbjct 166 ATCGATGGTATCCGACGACTCAACCTCGAGCGTAATGGTCTTTCCGGTCAAGGTCTTGAC 107 Query 133649 GAAAATCTGCAT 133660 |||||||||||| Sbjct 106 GAAAATCTGCAT 95 >seq9 Length=89190 Score = 122 bits (134), Expect = 8e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| ||||| || |||||||| | ||| | | | |||||||| Sbjct 17919 AAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCA-TCCTCGAG 17977 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | || || ||||||||||| || || || || |||||||| ||| Sbjct 17978 CTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGAT 18037 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | || |||| | |||||| || | ||||| || ||||| Sbjct 18038 CTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTGCC 18097 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 ||||| || || ||||| || |||||| || Sbjct 18098 CGTCAGGGTCTTCACGAAGATTTGCATGACT 18128 >seq50 Length=60635 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| || | || || ||||||||||| || || || || |||||| Sbjct 21146 TCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 21087 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | || |||| || ||| || || | ||||| | Sbjct 21086 TCTTGGATCTTCGACTTGACATTGTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATG 21027 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| |||| || || ||||| Sbjct 21026 GTCTTGCCCGTCAAGGTCTTGACGAA 21001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483403717117480