Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq442 219 5e-52 seq335 122 1e-22 >seq442 Length=20621 Score = 219 bits (242), Expect = 5e-52 Identities = 1156/1814 (64%), Gaps = 50/1814 (3%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGA 110421 ||||| |||||||| ||||||||||| || | ||||| || || | ||||| || | Sbjct 18653 CGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCA-GCCAGCAAAGTGCATGGATGT 18595 Query 110422 GAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATG 110479 || |||| ||| ||||| | |||| || ||| | ||| || ||| || ||| Sbjct 18594 GATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGA--TTGATCGATG 18537 Query 110480 AAGCGCCCCCGTTGTGCCGC-CATATCAATGACATCCTTCATCTTAATTTCCCAAACTGT 110538 ||| || || | || || | | || | || | | || ||||| || || Sbjct 18536 AAGGCACCGCGGTCGGCGGCTCGTCTCGACGATGGTGCCCTGCGAGATCTCCCAGACGGT 18477 Query 110539 GCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGC 110598 ||||| |||||| || | ||||| | | ||| ||||||||||| || || | Sbjct 18476 CTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATGTTCTGGATGGAGCCGCC-GT 18418 Query 110599 CTTC-ACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGA 110657 || | | ||| | | || || | | |||||||||||| || | ||||| |||| Sbjct 18417 CTGCGATGATGCGGTTCTCGATCTGGTCGGACCAGAGACCCATGTCGACCAGGTCCTTGA 18358 Query 110658 ----CGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATG 110713 | ||| | ||||| | ||||| || || ||| | | | ||||||| Sbjct 18357 GCAACCAGGGG----TTGACGACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAGATG 18302 Query 110714 TTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTT 110773 || | |||||||| || ||||| || || || | ||| || | ||||||||| || Sbjct 18301 TTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTG 18242 Query 110774 GGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGA 110833 ||||| ||||| | | || ||| || | ||| | || |||||| | |||||||| Sbjct 18241 GGCATGGGTGCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGA 18182 Query 110834 ACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCC 110892 |||||||| | | | | || | || |||||||||| | || ||| | || Sbjct 18181 GAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGC-CCCACATGTCGTATTGGAGCTCACC 18123 Query 110893 TTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACA 110952 | |||| | || || ||||| |||| || || | || || | |||| || Sbjct 18122 CTTGGACACTGGGGATCCCTCGTAGGTCTCGTACGTGCCGTGAATCTGGGCCAGCTCCAC 18063 Query 110953 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 111012 | || || || |||| || |||||||| ||||| | | || | |||||| Sbjct 18062 GGAGGCAGTCAAGGCACCGTGGTAGATGGTTTCGAAGATCTGGGAGTTGAGGAACTTGGC 18003 Query 111013 TTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 111072 || ||||| || | |||| | ||| |||| || ||||| || ||||| Sbjct 18002 CTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACACC 17943 Query 111073 CAAACCAATAGGTCTGTGTCGCATATTA--GACTTTCGCGCAGTCTCA---ACGGGATAA 111127 | ||| || ||||| || | || | ||| || ||| ||||| || Sbjct 17942 AACGGCAACTGGCCTGTGACGGAAGTTGCTGCGTTTGGC-----CTCCGGGACGGGGTAG 17888 Query 111128 AAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGT 111187 | || ||||||| ||| | || ||| |||| || ||||| || ||||| Sbjct 17887 TAGTTGACATCAATGATCTTGTTCAAGTTCTTGACGACAACCTGTGTGACCTCGTGAAGC 17828 Query 111188 TTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCC 111247 || | | || |||||| | | | |||||| |||| ||||| | || ||| Sbjct 17827 TTCTGGAAGTCGTAAGTGCCGTTGGCCATGTCAACATACGTTGGCAGGGCAAGGGACGCC 17768 Query 111248 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTG 111307 || || || || ||| |||||| | | | |||||| | || ||||| || | |||| Sbjct 17767 AAGTTACACACGGCCACCTCATCTGGAGCAGAGTACTCGACGATCTCTGTGCACAGGTTG 17708 Query 111308 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAG 111367 || || || || || | ||||| ||||| ||||| |||||| ||||||||||| Sbjct 17707 GAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAC 17648 Query 111368 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGC 111426 | |||| | || | || ||||| ||||| || | |||||| | | ||||| | || | Sbjct 17647 AACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGG 17588 Query 111427 GGCTGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 111484 | || | || | ||| ||| | |||||| |||||| || ||| || || Sbjct 17587 GCCTTGATAGTCTTGCGA---CCCTTACCCTCCTTCTCGTAGCCCTCGTCGAGCGCCTCG 17531 Query 111485 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCA 111543 | ||| || || | || | | || || || || || || || | || | ||| Sbjct 17530 AGCTCGTCGCCGTAAACATCTGCCAATCCAGG-GCATTCGTTGGGGCACATGAGGGTCCA 17472 Query 111544 TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 111603 | || | ||| || ||||||||||| || || |||||||| || | | || | Sbjct 17471 GTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAACAA 17412 Query 111604 ATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGA 111662 || | ||| || | || || | ||| ||||| || || || |||||||| | || Sbjct 17411 GTCACGGGCACGGA-CTTCCTCCTTACCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGA 17353 Query 111663 TATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCT 111718 |||||||||||||||||||| |||| |||| || || | | | ||| | || Sbjct 17352 CATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCC-ACCT 17294 Query 111719 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 111778 || | || || | || ||| ||| || ||||| ||||| || | ||| || | || Sbjct 17293 TGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAG 17234 Query 111779 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 111838 | || || || || ||| | | |||| | | | ||||| | || || Sbjct 17233 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCG 17174 Query 111839 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 111898 ||||| ||||| ||||||||| ||||| | | || || |||||||||| | Sbjct 17173 ATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCA 17114 Query 111899 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACC 111957 || |||||||| || ||| | |||||| || | ||| || || ||||||||| Sbjct 17113 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTG-GGCCTGTGGTGTACC 17055 Query 111958 AGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTAT 112015 |||||||||||| ||||| | ||||| |||| || |||| ||||| || |||| Sbjct 17054 AGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTAT 16997 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 ||||| | ||||| || || ||||| ||||| | || || ||||| | |||| Sbjct 16996 GTCTCGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAATCATG 16937 Query 112076 TACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTT 112135 | |||||| | || | ||||||| || || |||| ||| ||| ||||| Sbjct 16936 TGCTGTGGCCTCTCAGCAACCTTGCCATCAAGTCGGAGAAGGTAGGATCGCTCCAGGGTC 16877 Query 112136 TTGAGACCAAAGTA 112149 |||| || ||||| Sbjct 16876 TTGAAGCCGAAGTA 16863 >seq335 Length=25434 Score = 122 bits (134), Expect = 1e-22 Identities = 336/509 (66%), Gaps = 7/509 (1%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||||||||||||||| ||||| || || || || |||||| || || | |||||| || Sbjct 12318 GTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCC 12259 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| |||| | | ||| || |||||||||||||||||||| ||| Sbjct 12258 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACAGC 12199 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || |||| || || | || |||| | ||| | | | ||| | | ||| Sbjct 12198 AGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTATCTTGGATCCACCTAACTGC 12139 Query 122850 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 122909 ||| | |||||||||| || || || | || | |||||| | || | | || Sbjct 12138 CCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTCCG 12079 Query 122910 TTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT 122969 || || ||||| |||||| |||| || | || ||||| ||| | |||| | Sbjct 12078 TTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTT 12019 Query 122970 TTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCG 123028 || || || | ||| | ||||||| |||| ||||| ||||| ||||| | | Sbjct 12018 CTCGATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATCTGGACCTC-GCTG 11961 Query 123029 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 123087 | || | | || ||||| |||||||| || ||| | || ||||| || || Sbjct 11960 CTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGAGA 11901 Query 123088 ATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG---GTCTTCCAGTCGTCAAGATCT 123144 | | ||||| | |||| ||||| ||| | |||||||||| ||| || Sbjct 11900 ACATGGGAGATGAAGTAGCGCTCATCATCATTGAGGCGATTGTTCCAGTCGTGAAGGTCC 11841 Query 123145 TTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||||| | ||||| || || || ||||| Sbjct 11840 TTGGAGAGATCAATCTCCTCTGCTGTCCA 11812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628009806919200