Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq555 113 1e-19 seq2304 93.3 1e-13 >seq555 Length=17219 Score = 113 bits (124), Expect = 1e-19 Identities = 217/320 (68%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 378127 CCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGTCATATCA 378186 ||||| ||||| || |||||||||||| | | | | ||| || || || |||| Sbjct 10409 CCATCCTCTCCGTAGATGAATTGAACAATGTCACCAAGAGAGTTCCTGACGGTTCCATCA 10350 Query 378187 TATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGA 378246 || | ||||| | |||||| || || || | || || || ||| |||||||||| Sbjct 10349 TACTTGACCATGACATCTTCCAAAGCCTTGACGAGACGACGTTGAATGTAACCAGTTTCG 10290 Query 378247 CTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAAT 378306 ||| || || || |||||||| | ||| |||||||| |||| || |||||||| || Sbjct 10289 GCAGTCTTGACAGCGGTATCAATGAGACCCTCACGACCAGCCATGGCGTGGAAGAAGAAC 10230 Query 378307 TCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAA 378366 |||| ||||| || || | | | || |||||| ||| || | | | || || Sbjct 10229 TCAGATGGAGTGAGACCTCTCAGGTACGAGTTCTCAACAAAGCCACGAGACTCGGGAGAG 10170 Query 378367 TCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTT 378426 | ||||| ||||| |||| || | || || | || || || | ||||| || || Sbjct 10169 TAATCATCCTTTGTGAAATGTGGCAGGGTGCGGTACTTGAATCCGAAAGGAATACGCTTA 10110 Query 378427 CCATCAACATTCTGTTGACC 378446 || |||||| ||| || || Sbjct 10109 CCCTCAACAGACTGCTGTCC 10090 Score = 87.8 bits (96), Expect = 5e-12 Identities = 102/137 (74%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || ||||||||| |||| || ||| ||||| | ||||| ||||| ||||||||||| Sbjct 11099 CGCGGCACACCAAGTGTGACGTTC---TTAGACGACACACCGGCAAAATGGAAAGTATTG 11043 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | || |||| |||||||| || || || || |||| || || ||||| || Sbjct 11042 AGCGTCATCTGCGTAGCAGGCTCACCGATAGATTGGGCGGCAAGAATACCGACCATCTCG 10983 Query 377578 CCAGGATTGACAATAGC 377594 || || ||||| | ||| Sbjct 10982 CCGGGGTTGACCAGAGC 10966 >seq2304 Length=1284 Score = 93.3 bits (102), Expect = 1e-13 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 140579 CCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTC 140638 |||||| || || || || || || || || || || ||||| || || || || || || Sbjct 253 CCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTC 194 Query 140639 TTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGT 140698 ||||| || || |||| || || ||||| || | ||| || | ||||| || || || Sbjct 193 CTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCAACCTCGAGCGT 134 Query 140699 AACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||||||||| | || || || ||||||||||| Sbjct 133 AATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515199516065081