Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq555 113 1e-19
seq2304 93.3 1e-13
>seq555
Length=17219
Score = 113 bits (124), Expect = 1e-19
Identities = 217/320 (68%), Gaps = 0/320 (0%)
Strand=Plus/Minus
Query 378127 CCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGTCATATCA 378186
||||| ||||| || |||||||||||| | | | | ||| || || || ||||
Sbjct 10409 CCATCCTCTCCGTAGATGAATTGAACAATGTCACCAAGAGAGTTCCTGACGGTTCCATCA 10350
Query 378187 TATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGA 378246
|| | ||||| | |||||| || || || | || || || ||| ||||||||||
Sbjct 10349 TACTTGACCATGACATCTTCCAAAGCCTTGACGAGACGACGTTGAATGTAACCAGTTTCG 10290
Query 378247 CTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAAT 378306
||| || || || |||||||| | ||| |||||||| |||| || |||||||| ||
Sbjct 10289 GCAGTCTTGACAGCGGTATCAATGAGACCCTCACGACCAGCCATGGCGTGGAAGAAGAAC 10230
Query 378307 TCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAA 378366
|||| ||||| || || | | | || |||||| ||| || | | | || ||
Sbjct 10229 TCAGATGGAGTGAGACCTCTCAGGTACGAGTTCTCAACAAAGCCACGAGACTCGGGAGAG 10170
Query 378367 TCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTT 378426
| ||||| ||||| |||| || | || || | || || || | ||||| || ||
Sbjct 10169 TAATCATCCTTTGTGAAATGTGGCAGGGTGCGGTACTTGAATCCGAAAGGAATACGCTTA 10110
Query 378427 CCATCAACATTCTGTTGACC 378446
|| |||||| ||| || ||
Sbjct 10109 CCCTCAACAGACTGCTGTCC 10090
Score = 87.8 bits (96), Expect = 5e-12
Identities = 102/137 (74%), Gaps = 3/137 (2%)
Strand=Plus/Minus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| ||||||||| |||| || ||| ||||| | ||||| ||||| |||||||||||
Sbjct 11099 CGCGGCACACCAAGTGTGACGTTC---TTAGACGACACACCGGCAAAATGGAAAGTATTG 11043
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | || |||| |||||||| || || || || |||| || || ||||| ||
Sbjct 11042 AGCGTCATCTGCGTAGCAGGCTCACCGATAGATTGGGCGGCAAGAATACCGACCATCTCG 10983
Query 377578 CCAGGATTGACAATAGC 377594
|| || ||||| | |||
Sbjct 10982 CCGGGGTTGACCAGAGC 10966
>seq2304
Length=1284
Score = 93.3 bits (102), Expect = 1e-13
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 140579 CCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTC 140638
|||||| || || || || || || || || || || ||||| || || || || || ||
Sbjct 253 CCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTC 194
Query 140639 TTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGT 140698
||||| || || |||| || || ||||| || | ||| || | ||||| || || ||
Sbjct 193 CTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCAACCTCGAGCGT 134
Query 140699 AACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||||||||| | || || || |||||||||||
Sbjct 133 AATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 95
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515199516065081
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |