Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq442 214 2e-50
>seq442
Length=20621
Score = 214 bits (236), Expect = 2e-50
Identities = 482/717 (67%), Gaps = 32/717 (4%)
Strand=Plus/Plus
Query 53243 GAGACGTACGACTTAATGAG--CCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCA 53300
||||| ||| || | ||| ||||| ||||| || ||||| | ||||| || ||||
Sbjct 16992 GAGACATACAACCTCATGTCTTCCAAA--TACTTCACACACGCTTCCCCAACACTCTTCA 17049
Query 53301 ACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACT 53360
| |||||||| || | ||| | ||| ||||||| |||| | |||||||| ||
Sbjct 17050 ATGCTGGTACACCACAGGCCCAGCTTTCGTCCTGCTTCTTGGTCGACATGAAGGAGGATA 17109
Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420
|| || || ||||| || || |||||| |||||| ||||| ||| | || |
Sbjct 17110 GTATTGAGGGTATCTATGACACACTCAAGACTTGTGCCATGATCTCAAAGACTGCTGGAG 17169
Query 53421 GTATCGG------TATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGA 53474
||||||| ||||||| || | ||||||| | || || || || |
Sbjct 17170 GTATCGGATTGAATATCCAC----CGTA--TCCGTGCCACTGGTGCATACATTGCCGGTA 17223
Query 53475 CGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGT 53534
| ||||| | | | || || || |||||||||||||| ||||||||||| || |||
Sbjct 17224 CCAACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGGT 17283
Query 53535 ACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594
|||| |||| ||||| |||||| || | |||||||||||| | ||||| ||||
Sbjct 17284 ACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGGC 17343
Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654
|||| || | | ||||| || || || | ||| || ||| | || || | ||
Sbjct 17344 ACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGTAAGGAGGAAGTCCGTG 17403
Query 53655 GCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAG 53713
||||||| |||| ||| ||||| ||||||||||| ||||||||| | || ||||||
Sbjct 17404 CCCGTGACTTGTTCTAC-GCTCTCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAG 17462
Query 53714 GACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGT 53773
||| || ||| ||| |||||||| ||||| ||||| || | | ||| |||||
Sbjct 17463 AACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGATGTTTACGGC 17522
Query 53774 GAGGAGTTTAA------CGA-GATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAA 53826
|| ||| | | ||| || | | || | | | | | |||| ||| ||
Sbjct 17523 GACGAGCTCGAGGCGCTCGACGAGGGCTACGA-GAAGGAGGGTAAGGGTCGC------AA 17575
Query 53827 GAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAAC 53886
|| ||||||| | || | ||| | | || ||| || ||| ||||| ||||
Sbjct 17576 GACTATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAA 17635
Query 53887 GCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
|| | ||||| ||||||||| | |||| |||||||||||||||||| ||||
Sbjct 17636 CCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 17692
Score = 120 bits (132), Expect = 3e-22
Identities = 304/451 (67%), Gaps = 16/451 (4%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
||||||||||||||||| || || ||||| || || || || | |||||| | ||| |
Sbjct 18213 CGCAACTCCCTGCTCGTCGCACCCATGCCCACTGCCTCCACCTCCCAGATCCTCGGCTTC 18272
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| |||||||| ||||| | ||||||||| ||| || ||| || || |||
Sbjct 18273 AACGAGTGCTTCGAGCCATACACCTCGAACATCTACTCGCGTCGTGTCCTGGCTGGCGAG 18332
Query 55604 TTTGTCATGATCAACAAGCACCTCG----TCAAGGACCTGCAGAAGATCAACAAGTGGAA 55659
|| || | || ||| | ||| | ||||||||||| | || |||
Sbjct 18333 TT--CCAAG-TCGTCAA-CCCCTGGTTGCTCAAGGACCTGGTCGACATGGGTCTCTGGTC 18388
Query 55660 CCCGCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGA--ATCTGGAGA 55715
| |||||| ||| || || | || | |||| || ||| |||||| ||| |
Sbjct 18389 CGACCAGATCGAGAACCGCATCAT-CGCAG-ACGGCGGCTCCATCCAGAACATCCCCAAC 18446
Query 55716 TTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTG 55774
||| | || | |||||| | ||| ||| || |||||||| | ||| | |
Sbjct 18447 ATCCCCGCCGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCGCAGGGCACCATC 18506
Query 55775 ATTGACATGAG-TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTT 55833
| || | ||| || || || ||||| | |||||| || |||||||| || ||||||
Sbjct 18507 GTCGAGACGAGCCGCCGACCGCGGTGCCTTCATCGATCAATCCCAGTCCCTCAACATCCA 18566
Query 55834 CATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGG 55893
|||| || | || || ||| |||| | | || ||||||||| || |||||| ||
Sbjct 18567 CATGAAGGACCCAACAATGGGCAAGATCACATCCATGCACTTTGCTGGCTGGAAGCTCGG 18626
Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGACC 55924
|||||||| || |||||||| || || |||
Sbjct 18627 CCTCAAGACCGGAATGTACTACCTCCGCACC 18657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547196662754600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |