Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq442 214 2e-50 >seq442 Length=20621 Score = 214 bits (236), Expect = 2e-50 Identities = 482/717 (67%), Gaps = 32/717 (4%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAG--CCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCA 53300 ||||| ||| || | ||| ||||| ||||| || ||||| | ||||| || |||| Sbjct 16992 GAGACATACAACCTCATGTCTTCCAAA--TACTTCACACACGCTTCCCCAACACTCTTCA 17049 Query 53301 ACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACT 53360 | |||||||| || | ||| | ||| ||||||| |||| | |||||||| || Sbjct 17050 ATGCTGGTACACCACAGGCCCAGCTTTCGTCCTGCTTCTTGGTCGACATGAAGGAGGATA 17109 Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420 || || || ||||| || || |||||| |||||| ||||| ||| | || | Sbjct 17110 GTATTGAGGGTATCTATGACACACTCAAGACTTGTGCCATGATCTCAAAGACTGCTGGAG 17169 Query 53421 GTATCGG------TATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGA 53474 ||||||| ||||||| || | ||||||| | || || || || | Sbjct 17170 GTATCGGATTGAATATCCAC----CGTA--TCCGTGCCACTGGTGCATACATTGCCGGTA 17223 Query 53475 CGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGT 53534 | ||||| | | | || || || |||||||||||||| ||||||||||| || ||| Sbjct 17224 CCAACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGGT 17283 Query 53535 ACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594 |||| |||| ||||| |||||| || | |||||||||||| | ||||| |||| Sbjct 17284 ACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGGC 17343 Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654 |||| || | | ||||| || || || | ||| || ||| | || || | || Sbjct 17344 ACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGTAAGGAGGAAGTCCGTG 17403 Query 53655 GCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAG 53713 ||||||| |||| ||| ||||| ||||||||||| ||||||||| | || |||||| Sbjct 17404 CCCGTGACTTGTTCTAC-GCTCTCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAG 17462 Query 53714 GACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGT 53773 ||| || ||| ||| |||||||| ||||| ||||| || | | ||| ||||| Sbjct 17463 AACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGATGTTTACGGC 17522 Query 53774 GAGGAGTTTAA------CGA-GATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAA 53826 || ||| | | ||| || | | || | | | | | |||| ||| || Sbjct 17523 GACGAGCTCGAGGCGCTCGACGAGGGCTACGA-GAAGGAGGGTAAGGGTCGC------AA 17575 Query 53827 GAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAAC 53886 || ||||||| | || | ||| | | || ||| || ||| ||||| |||| Sbjct 17576 GACTATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAA 17635 Query 53887 GCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 || | ||||| ||||||||| | |||| |||||||||||||||||| |||| Sbjct 17636 CCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 17692 Score = 120 bits (132), Expect = 3e-22 Identities = 304/451 (67%), Gaps = 16/451 (4%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 ||||||||||||||||| || || ||||| || || || || | |||||| | ||| | Sbjct 18213 CGCAACTCCCTGCTCGTCGCACCCATGCCCACTGCCTCCACCTCCCAGATCCTCGGCTTC 18272 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||| ||||| | ||||||||| ||| || ||| || || ||| Sbjct 18273 AACGAGTGCTTCGAGCCATACACCTCGAACATCTACTCGCGTCGTGTCCTGGCTGGCGAG 18332 Query 55604 TTTGTCATGATCAACAAGCACCTCG----TCAAGGACCTGCAGAAGATCAACAAGTGGAA 55659 || || | || ||| | ||| | ||||||||||| | || ||| Sbjct 18333 TT--CCAAG-TCGTCAA-CCCCTGGTTGCTCAAGGACCTGGTCGACATGGGTCTCTGGTC 18388 Query 55660 CCCGCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGA--ATCTGGAGA 55715 | |||||| ||| || || | || | |||| || ||| |||||| ||| | Sbjct 18389 CGACCAGATCGAGAACCGCATCAT-CGCAG-ACGGCGGCTCCATCCAGAACATCCCCAAC 18446 Query 55716 TTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTG 55774 ||| | || | |||||| | ||| ||| || |||||||| | ||| | | Sbjct 18447 ATCCCCGCCGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCGCAGGGCACCATC 18506 Query 55775 ATTGACATGAG-TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTT 55833 | || | ||| || || || ||||| | |||||| || |||||||| || |||||| Sbjct 18507 GTCGAGACGAGCCGCCGACCGCGGTGCCTTCATCGATCAATCCCAGTCCCTCAACATCCA 18566 Query 55834 CATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGG 55893 |||| || | || || ||| |||| | | || ||||||||| || |||||| || Sbjct 18567 CATGAAGGACCCAACAATGGGCAAGATCACATCCATGCACTTTGCTGGCTGGAAGCTCGG 18626 Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGACC 55924 |||||||| || |||||||| || || ||| Sbjct 18627 CCTCAAGACCGGAATGTACTACCTCCGCACC 18657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547196662754600