Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq276 95.1 1e-14 >seq276 Length=28903 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 ||||||||| ||| ||| | ||||||||| || |||||||| | ||||| || Sbjct 13558 GACGTAGAACTGGAAGAACGCGTGGCACGGCGGCAGCGCCAT--GTCCTCGATCCGCGGG 13615 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 |||||| || | || | || | | ||||| || | | || ||| ||||| Sbjct 13616 GTTCCATGCACTCAGGATAATTCGGCGGTCATACGGCGTATGGCGCAGCTTGTGAATCAC 13675 Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905 | | |||||| || | |||||||||| ||||||| || || || || |||| | Sbjct 13676 CTCCGCCAGCTGATCAACACCCTGTCCCGTGTAGTCCGTCTGGGCGTCCACG-TACTTGG 13734 Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCC 6955 |||||||||| | ||||||||| |||||||| ||||| | || |||||| Sbjct 13735 CCCCAAAGTGCCGCCACTGGAATCCGTAGACAGGGCCGAGATCACCCTCC 13784 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34390 GGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCG 34449 |||||| || | ||||| |||||||| ||||||||| | ||||||||||| |||| || Sbjct 13784 GGAGGGTGATCTCGGCCCTGTCTACGGATTCCAGTGGCGGCACTTTGGGGCCAAGTA-CG 13726 Query 34450 GGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACA 34508 || || || ||||||| |||||||||| | || |||||| | | ||||| ||| Sbjct 13725 TGGACGCCCAGACGGACTACACGGGACAGGGTGTTGATCAGCTGGCGGAGGTGATTCACA 13666 Query 34509 CCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATC 34568 || | | || ||||| | | || | || | || |||||||| ||||| Sbjct 13665 AGCTGCGCCATACGCCGTATGACCGCCGAATTATCCTGAGTGCATGGAACCCCGCGGATC 13606 Query 34569 TCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618 | |||||||| || ||||||||| | ||| ||| ||||||||| Sbjct 13605 GAGGAC--ATGGCGCTGCCGCCGTGCCACGCGTTCTTCCAGTTCTACGTC 13558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448246559527440