Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq9 190 5e-43
seq2304 149 1e-30
seq50 129 1e-24
seq442 98.7 2e-15
>seq9
Length=89190
Score = 190 bits (210), Expect = 5e-43
Identities = 177/225 (79%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||||||||| ||||| | |||||| |||||||| || |||||||| ||||||| |||
Sbjct 17900 TCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAG 17959
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
||| | ||||| || ||||||||||| |||||||| ||||| || ||||| || ||||
Sbjct 17960 GGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAAT 18019
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
||| ||||||||||||||||| || || || ||||| || || || || |||||
Sbjct 18020 TCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTC 18079
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| ||||| || ||||| || || | |||||
Sbjct 18080 AAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18124
>seq2304
Length=1284
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | |||||| ||| ||| || |||||||| || || | || ||
Sbjct 316 ACGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCCGAGCGT 257
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| ||||| || ||||||||||| ||||| || ||||| || ||||| || || | ||
Sbjct 256 CCTCCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCC 197
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| || |||||||| || ||||| |||||||| || || |||||||||||
Sbjct 196 CTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCAACCTCGAG 137
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || |||||||| || | ||||| || || | ||||||
Sbjct 136 CGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 95
>seq50
Length=60635
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | ||| || | |||||| || ||||||||||| || |||||
Sbjct 21179 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 21120
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| || |||| ||| |||||||| |||||||| || || || |||
Sbjct 21119 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 21060
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| || || ||| || ||||| || ||||| ||||| ||||| | ||||| || ||
Sbjct 21059 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 21001
>seq442
Length=20621
Score = 98.7 bits (108), Expect = 2e-15
Identities = 188/276 (68%), Gaps = 6/276 (2%)
Strand=Plus/Minus
Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||||||||| | ||||| ||||| |||||| ||||| || ||||
Sbjct 17687 GTTCTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTACAACATGAAAGGGTTTCC 17631
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||||| |||| | |||||||| | |||||||| |||||| || ||||||
Sbjct 17630 TGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATAGTCTTGCG 17571
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| || || || |||||||| | || |||| |||||| || || || |||||
Sbjct 17570 ACCCTTACCCTCCTTCTCGTAGCCCTCGTCGAGCGCCTCGAGCTCGTCGCCGTAAACATC 17511
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| | || || || |||||||| | ||| |||| | |||| | || || ||
Sbjct 17510 TGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACG 17451
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
||||||||||| || | |||||| || |||||
Sbjct 17450 CTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAA 17415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159110014427855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |