Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq9 107 2e-18 seq2304 86.0 5e-12 >seq9 Length=89190 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| ||| || || || || ||||| | ||| || || | || || Sbjct 17916 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 17975 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || || ||||||||||| | ||| | | ||| |||||| | Sbjct 17976 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 18035 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || |||| | | | |||||| ||||||||| || | |||||| | || Sbjct 18036 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 18095 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || || ||||||||||| Sbjct 18096 CCCGTCAGGGTCTTCACGAAGATTTGCAT 18124 >seq2304 Length=1284 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || ||||||||||| || || || || || ||| | || || | | || || Sbjct 304 CACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCCGAGCGTCCTCCCATCCTC 245 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCA 39193 ||||| |||||||| || || || |||||||||| ||||||| | || ||| || || Sbjct 244 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG-ATGCCCTCCTTATCTT 186 Query 39194 TGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| || |||| | | | ||||| |||||| || || | ||| || | | Sbjct 185 GGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCAACCTCGAGCGTAATGGTCT 126 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| |||| || || || || || ||||| Sbjct 125 TTCCGGTCAAGGTCTTGACGAAAATCTGCAT 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429530800409051