Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq9 107 2e-18
seq2304 86.0 5e-12
>seq9
Length=89190
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || ||| ||| || || || || ||||| | ||| || || | || ||
Sbjct 17916 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 17975
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| ||||| || || || || ||||||||||| | ||| | | ||| |||||| |
Sbjct 17976 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 18035
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255
|| || |||| | | | |||||| ||||||||| || | |||||| | ||
Sbjct 18036 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 18095
Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|||||||| || || || |||||||||||
Sbjct 18096 CCCGTCAGGGTCTTCACGAAGATTTGCAT 18124
>seq2304
Length=1284
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || ||||||||||| || || || || || ||| | || || | | || ||
Sbjct 304 CACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCCGAGCGTCCTCCCATCCTC 245
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCA 39193
||||| |||||||| || || || |||||||||| ||||||| | || ||| || ||
Sbjct 244 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG-ATGCCCTCCTTATCTT 186
Query 39194 TGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
||| || |||| | | | ||||| |||||| || || | ||| || | |
Sbjct 185 GGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCAACCTCGAGCGTAATGGTCT 126
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|||| |||| || || || || || |||||
Sbjct 125 TTCCGGTCAAGGTCTTGACGAAAATCTGCAT 95
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429530800409051
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |