Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq9 152 1e-31 seq50 125 2e-23 seq2304 113 1e-19 >seq9 Length=89190 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||||||| | ||| || ||||| || || |||| |||||||| | | || Sbjct 17903 ACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGT 17962 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || ||||| || Sbjct 17963 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCC 18022 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||| || || || | ||||| || | Sbjct 18023 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAG 18082 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||||| || || | ||| | |||||| Sbjct 18083 GGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18124 >seq50 Length=60635 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| | ||| | ||||| || |||||||| ||||| ||||| Sbjct 21179 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 21120 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || ||||| || ||||||||||||||||| ||| ||| ||| Sbjct 21119 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 21060 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 || || || |||| || || || | ||||| |||||||||||||| || || | ||| Sbjct 21059 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 21001 >seq2304 Length=1284 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| || ||| || || |||| ||||| ||| | | || Sbjct 316 ACGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCCGAGCGT 257 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 |||||||| || |||||||| || ||||| || || || || ||||| || || || || Sbjct 256 CCTCCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCC 197 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||||||||| ||| || |||||||| || || | || || || | Sbjct 196 CTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCAACCTCGAG 137 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || ||||| || ||||| || || | ||| | ||||| Sbjct 136 CGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192488005401938