Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201
6-06-24] 2,827 sequences; 30,179,533 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq9 152 1e-31
seq50 125 2e-23
seq2304 113 1e-19
>seq9
Length=89190
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||||||| | ||| || ||||| || || |||| |||||||| | | ||
Sbjct 17903 ACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGT 17962
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || |||||||| || || || ||||| || ||||| ||
Sbjct 17963 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCC 18022
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||| || || || | ||||| || |
Sbjct 18023 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAG 18082
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||||||||||| || || | ||| | ||||||
Sbjct 18083 GGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18124
>seq50
Length=60635
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | ||| | ||||| || |||||||| ||||| |||||
Sbjct 21179 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 21120
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || ||||| || ||||||||||||||||| ||| ||| |||
Sbjct 21119 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 21060
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| || || |||| || || || | ||||| |||||||||||||| || || | |||
Sbjct 21059 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 21001
>seq2304
Length=1284
Score = 113 bits (124), Expect = 1e-19
Identities = 158/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| || ||| || || |||| ||||| ||| | | ||
Sbjct 316 ACGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCCGAGCGT 257
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|||||||| || |||||||| || ||||| || || || || ||||| || || || ||
Sbjct 256 CCTCCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCC 197
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| ||||||||||| ||| || |||||||| || || | || || || |
Sbjct 196 CTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCAACCTCGAG 137
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || ||||| || ||||| || || | ||| | |||||
Sbjct 136 CGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 95
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192488005401938
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |