Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq442 156 6e-33 >seq442 Length=20621 Score = 156 bits (172), Expect = 6e-33 Identities = 397/601 (66%), Gaps = 10/601 (2%) Strand=Plus/Minus Query 77941 AAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCT 78000 ||||||| |||||||||||||||| || |||||||| | | |||||| || | | || Sbjct 17517 AAACATCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCT 17458 Query 78001 TAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTAT 78060 || || ||||| |||||||| || ||||| ||||| || | || |||| | Sbjct 17457 CGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAACAAGTCACGGGCACGGA 17398 Query 78061 GTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATG 78120 ||| || || || |||||| | | || || ||||| | | ||| | ||||||| Sbjct 17397 CTTCCTCCTTACCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATG 17338 Query 78121 GTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGG 78180 | || | || || || | | | ||||| || || || || || || || | || || | Sbjct 17337 GCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCTTGGTCAACGTACCTTG 17278 Query 78181 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAG 78240 ||||||| || | || | | ||| || | ||| ||||| || |||| || || || | Sbjct 17277 CGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAGTTTCCGTTGGTACCGG 17218 Query 78241 AAATATAACTTCCACTTGCGCGAATATTACTAATGGATAT----CCCTATTCCTCCTGCC 78296 ||| || ||| | || || ||| ||||||| || || ||||| || Sbjct 17217 CAATGTATGCACCAGTGGCACGGATA----CGGTGGATATTCAATCCGATACCTCCAGCA 17162 Query 78297 ATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCC 78356 |||| || || | || ||| || | ||| || ||||||||||| ||||| || ||| Sbjct 17161 GTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCC 17102 Query 78357 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAAT 78416 |||||| | | || ||| || | || || || || ||||| || | | Sbjct 17101 TTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGT 17042 Query 78417 GTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGAT 78476 || || || || || || || |||| ||| | || |||||||| || || | Sbjct 17041 GTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCGATTGTCTTC 16982 Query 78477 TCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTC 78535 || || ||| || | ||||| || ||||| |||||||| | ||| ||||| || || || Sbjct 16981 TCAATATCCTCACCG-TGAATGCCCACCGCAACACGCATAATCATGTGCTGTGGCCTCTC 16923 Query 78536 A 78536 | Sbjct 16922 A 16922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694644252141280