Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq442 149 9e-31 >seq442 Length=20621 Score = 149 bits (164), Expect = 9e-31 Identities = 392/593 (66%), Gaps = 8/593 (1%) Strand=Plus/Minus Query 76536 AAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCT 76595 ||||||| |||| ||||| ||||| || || ||||| | | ||| || || | | || Sbjct 17517 AAACATCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCT 17458 Query 76596 TAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTAC 76655 || || ||||| |||||||| || ||||| ||||| || | || |||| | Sbjct 17457 CGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAACAAGTCACGGGCACGGA 17398 Query 76656 GTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATG 76715 ||| || || || |||||| | | || |||||||| | | ||| | ||||||| Sbjct 17397 CTTCCTCCTTACCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATG 17338 Query 76716 GTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGG 76775 | || | || || || | | |||| || || || || || || || || | || || | Sbjct 17337 GCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCTTGGTCAACGTACCTTG 17278 Query 76776 CAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAG 76835 | ||||| || | || | | ||| || | ||||||||| || | || || || || | Sbjct 17277 CGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAGTTTCCGTTGGTACCGG 17218 Query 76836 AAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTT 76895 ||| || ||| ||||| ||| ||| | || || ||||| || | | Sbjct 17217 CAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCGATACCTCCAGCAGTCT 17158 Query 76896 TAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCA 76955 | ||||| | ||||| || | |||||||||||| ||||| |||||||| ||| ||| Sbjct 17157 TTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCA 17098 Query 76956 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAG 77015 ||| | | || ||| || | || || || || ||||| || | ||| | Sbjct 17097 TGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTG 17038 Query 77016 GAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTG-CTTCT 77074 | || || || ||||| |||| ||| | || |||||||| || || || ||||| Sbjct 17037 GGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCGAT---TGTCTTCT 16981 Query 77075 --ATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGG 77124 |||||| || | ||||| || || || |||||||| | ||| ||||| || Sbjct 16980 CAATATCCTCACCG-TGAATGCCCACCGCAACACGCATAATCATGTGCTGTGG 16929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712909206680640