Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq9 156 4e-33 seq2304 150 2e-31 seq50 118 1e-21 >seq9 Length=89190 Score = 156 bits (172), Expect = 4e-33 Identities = 163/212 (77%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || || ||| ||||||||| ||||| || || || |||||||| | || ||| Sbjct 17916 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 17975 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| ||||||||||| ||||||| ||||| | |||||||||| | Sbjct 17976 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 18035 Query 41774 ATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || || ||| || | || | ||| ||| |||||||||||| | || || || | Sbjct 18036 ATCTTGGACTTGACATTGTCG--ATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCT 18093 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | |||||||| ||||| ||||| || |||||| Sbjct 18094 TGCCCGTCAGGGTCTTCACGAAGATTTGCATG 18125 >seq2304 Length=1284 Score = 150 bits (166), Expect = 2e-31 Identities = 174/233 (75%), Gaps = 10/233 (4%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | ||||| || ||||||||||||||||| ||||| |||||| Sbjct 322 GCCGCCACGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCC 263 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || | | | || |||||||||||||| ||||| ||||||||||| ||||||| || Sbjct 262 GAGCGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGG 203 Query 41755 AACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGAC 41809 | || |||||| || ||| || ||| | | | ||| | || || |||| Sbjct 202 GATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATG-----GTATCCGACGAC 148 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| | ||| || || || || |||| ||||| |||||||||||||| Sbjct 147 TCAACCTCGAGCGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 95 >seq50 Length=60635 Score = 118 bits (130), Expect = 1e-21 Identities = 137/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||||| || ||||| | || |||||||||||||| || || | Sbjct 21181 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 21122 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 |||||||||| ||||||| ||||| | ||||||||| ||| || ||| || | Sbjct 21121 TCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 21062 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | ||| ||| ||||| ||||| | || || || || ||||||| ||||| || Sbjct 21061 CG--ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 21004 Query 41851 GAA 41853 ||| Sbjct 21003 GAA 21001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462287663332400