Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3078 116 8e-21 seq2589 89.7 1e-12 >seq3078 Length=65249 Score = 116 bits (128), Expect = 8e-21 Identities = 312/472 (66%), Gaps = 14/472 (3%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 |||||| |||||||||| |||| | ||||| ||||| | || ||||| ||| Sbjct 48940 TTTGCCCAGCGTCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTC 48999 Query 230233 TGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGA 230291 ||| |||| || ||||| ||| ||| | ||| ||||||| | || ||||| Sbjct 49000 -GCGTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGA 49058 Query 230292 GTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCT 230351 | ||||| ||||||||||||||||| | |||| | || | | || | || Sbjct 49059 GCTCATCTCCCGCGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCACCT 49118 Query 230352 C-----CAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAA 230406 | | ||||| | || | | ||| || | |||| || || || || Sbjct 49119 TAGACACCGCCCAAGCAAGCA-----GGCCGTCCAAGACGTCATCACCGAGGCTGTCACC 49173 Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAA 230466 | ||| |||||||| | || ||| |||| ||| ||| | ||||||||||| || Sbjct 49174 ATCGAGCAGGAGTTCTTGACAGAGGCTCTTCCCTGTGCCCTGCTCGGCATGAACGC-CAA 49232 Query 230467 CTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525 ||| ||| || ||||| || ||||| |||||| | | | | | || || |||| Sbjct 49233 CTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGCAACGA 49292 Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585 ||| ||||| || | ||||| || | || |||||| ||| || || ||| || Sbjct 49293 GAAGTACTACAAGTCGACCAACCCATTCGACTTCATGGAGAACATCTCCCTGGCAGGAAA 49352 Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||||||||| ||||||||| ||||| || | | ||||||| ||| Sbjct 49353 GACCAACTTCTTCGAGAAGCGTGTCGCCGACTACCAAAAGACTGGTGTCATG 49404 >seq2589 Length=370448 Score = 89.7 bits (98), Expect = 1e-12 Identities = 199/299 (67%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 319369 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 319428 |||| |||||| ||| | ||||| || ||| ||||| |||| || || |||||| Sbjct 193827 AGGGTGTAGTAGCTCTTAGCCTCGGGCTTCTGCTTGACGAAATCGGCCAAGTTACCCTTG 193768 Query 319429 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 319488 || |||||| ||| ||||| ||| ||| ||||| || | |||||| Sbjct 193767 TAACAGGCCAGCTTCTTTCCAGGCTCGTAGTGGTAGATATCAGTGCAGACTTCATCGAGG 193708 Query 319489 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 319548 || ||||||||||| || || |||| | | | | || | || | | ||||| || Sbjct 193707 AAGCCGGAGTCGTGGGAAACGATCAGGGAGGTGATCTCGGTGTGGGTCTTGAGGTAATCC 193648 Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608 | |||| | ||||| | ||| | || || || || ||||||||||| || | Sbjct 193647 TGGAGCCACTTGACGTTGGCAACATCCAAGTGATTAGTAGGTTCGTCAAGAAGGAGAACA 193588 Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667 | || |||| | ||| || | |||||||| || ||||| ||||| || ||||| || Sbjct 193587 TCAGCCTTCATCAACATAGCTCTGGCAAGAGCAAGCTTCATCTTCCATCCACCGGAGAG 193529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057781632165380