Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3078 358 7e-94 seq2808 132 5e-26 seq2768 129 6e-25 seq2512 120 3e-22 >seq3078 Length=65249 Score = 358 bits (396), Expect = 7e-94 Identities = 571/812 (70%), Gaps = 23/812 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| || ||||| |||||||| |||||||| | |||||| | ||||| Sbjct 48544 ATCTGGCAGATGTATAAGAAGGCAGAGGCGTCTTTCTGGACAGCAGAGGAGATTGACCTC 48603 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | || | |||||| | |||||| | |||||| Sbjct 48604 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGACGATGAGCGCTACTTCATCTCC 48663 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || |||||||| ||||| || ||||||||||| || ||||||| Sbjct 48664 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 48723 Query 116813 TTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||| ||||| ||| | | || || || ||||||||||| || || ||| || Sbjct 48724 TTCAG-CAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGAT 48782 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 |||||| | ||| | || | || || |||||||||||| ||| | ||| Sbjct 48783 TGAGAACATCCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAA------GGA 48836 Query 116932 GGAGAAGCTC------CGTT--TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAG 116983 | || |||| | | | || || ||||||||||| || || ||| |||| || Sbjct 48837 GCAG--GCTCAACGCACATACCTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAG 48894 Query 116984 AAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTG 117043 |||||||| ||||| | | |||||| | || || | |||| | | |||| || Sbjct 48895 AAGGCCGACTGGGCAGTCAGGTGGATCCAAGACAAGGATTCTACCTTTGCCCAGCGTCTC 48954 Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103 || |||||||| ||||| ||||| ||||||| || ||| ||||| |||| || ||| Sbjct 48955 GTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCGTCCATTTTCTGG 49014 Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163 |||||||| || || |||||| | |||||||| ||| |||||||||||||||| | ||| Sbjct 49015 CTCAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCCCGCGAC 49074 Query 117164 GAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGC 117223 |||||||| || ||||| ||||| | || ||| || | || || || ||| Sbjct 49075 GAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCACCTTAGACACCGCCCAAGC 49134 Query 117224 GCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACC 117283 | | |||| || || ||||||| || ||| ||||||||||| ||| | || Sbjct 49135 AAGCAGGCCGTCCAAGACGTCATCACCGAGGCTGTCACCATCGAGCAGGAGTTCTTGACA 49194 Query 117284 GAAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGA 117342 || || | | || |||| ||||| || | || | | |||| ||||||||| || Sbjct 49195 GAGGCTCTTCCCTGTGC-CCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 49253 Query 117343 GTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAA 117402 ||||||||||||||||||||||||| || | | || ||| ||||||| || |||| Sbjct 49254 GTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGCAACGAGAAGTACTACAAGTCGACCAA 49313 Query 117403 CCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||| | ||||| ||| | ||||||| ||| Sbjct 49314 CCCATTCGACTTCATGGAGAACATCTCCCTGG 49345 >seq2808 Length=116519 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || |||||||| || |||||| | || || || | || Sbjct 80695 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 80754 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || || | ||||| ||||| || ||| |||||||| Sbjct 80755 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 80814 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || |||| |||||||| ||||||||| Sbjct 80815 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 80874 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| || || Sbjct 80875 ATCCAGAAGGAGTCCACTCTTCA 80897 >seq2768 Length=91863 Score = 129 bits (142), Expect = 6e-25 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| ||||||||| | || ||||| || |||| | | | | |||| | ||| Sbjct 15049 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAACGTT-AAGAG 14991 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | ||||| ||||| || ||| ||||||||||||| || |||| ||| ||||| Sbjct 14990 CAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAA 14931 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || |||| ||||||||| |||||||||||||||||||||| | || || || Sbjct 14930 GCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 14871 Score = 123 bits (136), Expect = 3e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| || || || |||| || ||| | || Sbjct 14617 ATGCAGATTTTTGTCAAGACTCTTACTGGCAAGACGATTACGCTCGAGGTGGAATCATCC 14558 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || |||| ||||| ||||| || ||| ||||||| Sbjct 14557 GATACCATTGACAACG-TCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCCCCGGACCA 14499 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| ||| |||| |||| |||||||| |||||||| Sbjct 14498 GCAGCGCCTGATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAA 14439 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 ||| ||||||||| |||| |||||| Sbjct 14438 CATTCAGAAGGAGTCCACCCTGCAT 14414 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| |||||||| | || || || | || Sbjct 14845 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTGGAGTCATCC 14786 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| || || | ||||| |||||||| || | |||||| Sbjct 14785 GACACCATCGATAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 14726 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | ||||||||| ||||| || |||| ||||| ||| ||||||||| Sbjct 14725 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGACTACAAC 14666 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||||||| | || || || Sbjct 14665 ATTCAGAAGGAGTCGACTCTCCA 14643 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || || || ||| | || ||||| | | Sbjct 14389 ATGCAAATCTTCGTCAAGACCCTCACCGGAAAGACAATTACCCTGGAAGTCGAGTCGTCG 14330 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| ||||| || || | || || ||||||||||| ||||||| Sbjct 14329 GATACGATCGACAACG-TCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCA 14271 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||||||||| ||||| || || | || ||||| || ||||| Sbjct 14270 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGTCTGATTACAA 14211 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| | ||||| || Sbjct 14210 CATCCAGAAGGAGTCCACATTACATCTTGT 14181 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || ||||| || |||| || || | | Sbjct 14161 ATGCAGATTTTCGTCAAGACCCTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCGTCG 14102 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| || || ||||| ||||| ||||||| Sbjct 14101 GACACCATTGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCA 14043 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || || ||||| || || | | | || || | ||||||||| Sbjct 14042 GCAGCGTTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTACAA 13983 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| ||| || || Sbjct 13982 CATCCAGAAGGAGAGCACTCTTCA 13959 >seq2512 Length=28997 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || | |||||||| ||||||||| | || ||||| || |||| | | Sbjct 21047 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 21106 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| || ||| ||||||||||||| || Sbjct 21107 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAACGCCTG 21166 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || || | |||||||| ||||||||||||||||||| Sbjct 21167 ATCTTCGCTGGCAAGCAGCTTGAGGATGGACGCACCCTTTCCGACTACAACATCCAGAAG 21226 Query 40879 G 40879 | Sbjct 21227 G 21227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515199067809760