Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq2768 118 9e-22
seq2808 107 2e-18
>seq2768
Length=91863
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||| || || |||||||| ||||||| || | | ||||||
Sbjct 13952 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 14011
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || |||||| |||| | ||||||||| || || || || |||||||| ||
Sbjct 14012 GAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 14071
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | || | |||||||| ||| ||||||| || | || ||
Sbjct 14072 AATCTTGGACTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGAGTAATGGTCTT 14131
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || |||||||||||
Sbjct 14132 TCCAGTCAGGGTCTTGACGAAAATCTGCAT 14161
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | || ||||| || ||||||||||| || || ||||| |||||
Sbjct 14409 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCC 14468
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| ||| || ||||| |||| || |||||||| || || || || |||||||||||| |
Sbjct 14469 AACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCTTGA 14528
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | || | ||| || | || | || ||||||| || | ||| ||
Sbjct 14529 ATCTTCGACTTGACGTTGTCAATGGTATCGGATGAT-TCCACCTCGAGCGTAATCGTCTT 14587
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| || ||||| || ||||||||||||||
Sbjct 14588 GCCAGTAAGAGTCTTGACAAAAATCTGCAT 14617
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || ||||||||||| || | |||||| |||||
Sbjct 14637 ACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCA 14696
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| | || || |||||||| || ||||| ||||||||||||||
Sbjct 14697 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 14756
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| | ||| ||||| | || | || |||
Sbjct 14757 ATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTG 14816
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || || ||||||||
Sbjct 14817 CCCGTGAGGGTCTTGACGAAGATCTGCAT 14845
Score = 104 bits (114), Expect = 2e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || |||||||| ||| | ||||| |||||
Sbjct 14865 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 14924
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| |||| ||||| ||||| || || || || ||||||||||||
Sbjct 14925 AGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGG 14984
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||||| | |||| ||| || | | ||||||||| | ||| | || |||
Sbjct 14985 ATCTTGCTCTTAACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 15044
Query 118710 CCGGTCA 118716
|| ||||
Sbjct 15045 CCAGTCA 15051
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| || | ||| ||||| || || ||||||||||| || || || ||||||||
Sbjct 14182 CAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCCTCGA 14241
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| || || ||| | || || |||||||| || || || ||||||||||| ||| |
Sbjct 14242 GCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGA 14301
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | |||| || |||| |||||| || | ||| | || || |
Sbjct 14302 TCTTAGACTTGACGTTGTCGATCGTATCCGACGACTCGACTTCCAGGGTAATTGTCTTTC 14361
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || || || || || || |||||
Sbjct 14362 CGGTGAGGGTCTTGACGAAGATTTGCAT 14389
>seq2808
Length=116519
Score = 107 bits (118), Expect = 2e-18
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
|||||| || | ||||| |||||||| | || ||||| || || |||||||| ||
Sbjct 80922 ACCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 80863
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| ||||| ||||||||||| || || ||| |||| || |||||||| || || ||
Sbjct 80862 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 80803
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| ||||||||||| || || || || | |||| ||||| | ||| ||
Sbjct 80802 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCAC 80743
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||| | ||| | || ||||| ||||| || || || || || |||||| ||
Sbjct 80742 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 80691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433813871875192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |