Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq2768 116 4e-21 seq2808 111 2e-19 >seq2768 Length=91863 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| |||| ||||| || |||| || |||||||| || ||||| Sbjct 14654 CTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAA 14713 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 14714 AATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 14773 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || ||||| || | |||||||| |||||||| || ||||| || Sbjct 14774 ATCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGAC 14833 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 14834 GAAGATCTGCAT 14845 Score = 114 bits (126), Expect = 1e-20 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||||||||| ||| |||||| ||||| ||||| || | ||| || || |||| || Sbjct 14409 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCC 14468 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | |||||| ||||| || || || ||||||||||| | || | | |||||||| | || Sbjct 14469 AACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGT-CTTG 14527 Query 43095 ATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 | | || | |||| ||| | | | || ||| |||||||| |||| ||| || || | Sbjct 14528 AATCTTCGACTTGA-CGTTGTCAATGGTATCGGATGATTCCACCTCGAGCGTAATCGTCT 14586 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || ||||| ||||| || ||||| Sbjct 14587 TGCCAGTAAGAGTCTTGACAAAAATCTGCAT 14617 Score = 111 bits (122), Expect = 2e-19 Identities = 170/237 (72%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 42949 CCTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 43008 ||||||| || || | | ||| | |||||| || | ||||||||||| || || |||| Sbjct 13927 CCTATTGGCCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGT 13986 Query 43009 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 43068 | || ||| |||| | | || || ||||||||||||||||| || | |||||||||| Sbjct 13987 AGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGT 14046 Query 43069 CGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCT 43126 | | || | | |||||| ||| ||| | || | |||| ||| | | | ||||| Sbjct 14047 CCGGTGGGATACCCTCCTTATCC-TGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGA 14104 Query 43127 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || |||| || ||||| || || || || ||||| || || || ||||| Sbjct 14105 CGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 14161 Score = 102 bits (112), Expect = 9e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 ||| |||||| |||||| || || |||||||||| ||| || || | || || ||||| Sbjct 14186 ATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCCTCGAGCTG 14245 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||| || ||||| || || ||||||||||| | || | || |||||| || ||| || Sbjct 14246 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTT 14305 Query 43100 TTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 43158 |||| ||| | | | ||| || ||| || || || | || || || || || | Sbjct 14306 AGACTTGA-CGTTGTCGATCGTATCCGACGACTCGACTTCCAGGGTAATTGTCTTTCCGG 14364 Query 43159 TTAGCGTCTTTACAAAGATTTGCAT 43183 | || ||||| || ||||||||||| Sbjct 14365 TGAGGGTCTTGACGAAGATTTGCAT 14389 >seq2808 Length=116519 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| || || ||||| || | || || || |||| || Sbjct 80903 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 80844 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || ||||| || || ||||||||||| | || | | |||||||||| | Sbjct 80843 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 80784 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || |||| | | | |||||| ||| ||||| || | ||||| || ||| Sbjct 80783 ATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTG 80724 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || ||||| || ||||||||||| Sbjct 80723 CCCGTCAGGGTCTTCACGAAGATTTGCAT 80695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571795256227280