Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2931 107 4e-18 seq3078 95.1 2e-14 >seq2931 Length=79620 Score = 107 bits (118), Expect = 4e-18 Identities = 179/256 (70%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| ||||| |||||||| ||||| || || ||| || || || || |||||| Sbjct 58236 CCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCGTAGATACCC 58177 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904 ||||| ||||| || | | | | | | |||||| || || || |||| |||| ||| Sbjct 58176 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGAGAGCTGGGCCTGTG-GTGT 58118 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| ||| || ||||| |||||||| || || || || | |||||||| | || Sbjct 58117 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 58058 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 ||| || || | ||| || ||||||||||| || || |||||||||||||| Sbjct 58057 TGTCTCGATTGTCTTCTCGATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCAT 57998 Query 95025 GTCCTGAGGGCGCTCA 95040 || ||| || | |||| Sbjct 57997 GTGCTGTGGCCTCTCA 57982 >seq3078 Length=65249 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||| || || ||||| || |||||||| || | ||||| |||||||||||| Sbjct 48955 GTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCGTCCATTTTCTGG 49014 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | || |||| || |||| |||||| ||| |||| || | ||| Sbjct 49015 CTCAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCCCGCGAC 49074 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || ||||| || ||||| || ||| | || || Sbjct 49075 GAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTT 49109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989544365305330