Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq3078 122 1e-22
>seq3078
Length=65249
Score = 122 bits (134), Expect = 1e-22
Identities = 363/557 (65%), Gaps = 6/557 (1%)
Strand=Plus/Minus
Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217
|| ||||| || ||| ||||||||||| | || | |||||||| || || ||
Sbjct 49100 CAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGG 49041
Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277
|| | ||| || |||||||| || ||||| || |||||||| || || || || |||||
Sbjct 49040 CCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATGGACGCGAAGGAGCCGGAGAAGAAG 48981
Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 36334
|| || || || || || ||||||| || | || || | | | |||| ||
Sbjct 48980 ATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGG 48921
Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394
|||||| | ||||| ||||||||||| || | ||||| || ||||| || |||||
Sbjct 48920 ATCCACCTGACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 48861
Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454
||||| || | || | || || | ||||| || || | || || |
Sbjct 48860 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 48801
Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514
|| | || ||||| ||||| ||||| || |||||||| || | || || | |||
Sbjct 48800 TCGGCGTGGATGTTCTCAATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATC 48741
Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574
|| || || | | || || || | || || || || ||||||||| || ||
Sbjct 48740 TGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCG 48681
Query 36575 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGTGTTA-GTTTATTCCAA 36631
|| || || | || || || || || || | | | || | | || |||||
Sbjct 48680 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAG 48621
Query 36632 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 36691
|| | | || || || | || | || || ||||||| || || |||||||||||
Sbjct 48620 TCGTGAAGGTCCTTGGAGAGGTCAATCTCCTCTGCTGTCCAGAAAGACGCCTCTGCCTTC 48561
Query 36692 TTATACATATTCCAGAT 36708
|||||||| | ||||||
Sbjct 48560 TTATACATCTGCCAGAT 48544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658147081897840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |