Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq3078 118 1e-21
>seq3078
Length=65249
Score = 118 bits (130), Expect = 1e-21
Identities = 362/557 (65%), Gaps = 6/557 (1%)
Strand=Plus/Minus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| ||||| || ||| |||||||| || | || | |||||||| || || ||
Sbjct 49100 CAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGG 49041
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|| | ||| || |||||||| || ||||| || || ||||| || || || || ||||||
Sbjct 49040 CCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATGGACGCGAAGGAGCCGGAGAAGAAG 48981
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC---TGTCATGT 42241
|| || || || || || ||||||| || | || || | | | |||| ||
Sbjct 48980 ATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGG 48921
Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301
|||||| | ||||| ||||||||||| || | ||||| || || || ||||||||
Sbjct 48920 ATCCACCTGACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 48861
Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361
||||| || | || | || || | ||||| ||||| | || || |
Sbjct 48860 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 48801
Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421
|| | || ||||| ||||| || || || |||||||| || | ||| || | | |
Sbjct 48800 TCGGCGTGGATGTTCTCAATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATC 48741
Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481
|| || || | | || || || | || ||||| || ||||||||| || ||
Sbjct 48740 TGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCG 48681
Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTA-ATTTATTCCAA 42538
|| || || | || || || || || || || || || | || |||||
Sbjct 48680 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAG 48621
Query 42539 TCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTT 42598
|| | | || || || | || | || ||| | ||||| || || || ||||||||
Sbjct 48620 TCGTGAAGGTCCTTGGAGAGGTCAATCTCCTCTGCTGTCCAGAAAGACGCCTCTGCCTTC 48561
Query 42599 TTATACATATTCCAGAT 42615
|||||||| | ||||||
Sbjct 48560 TTATACATCTGCCAGAT 48544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671112975235760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |