Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3078 192 9e-44 seq2931 141 1e-28 >seq3078 Length=65249 Score = 192 bits (212), Expect = 9e-44 Identities = 378/558 (68%), Gaps = 6/558 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | ||||| || ||||| |||| || || ||||| | || ||| | || || Sbjct 48544 ATCTGGCAGATGTATAAGAAGGCAGAGGCGTCTTTCTGGACAGCAGAGGAGATTGACCTC 48603 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | ||| | | || |||||| | || || || Sbjct 48604 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGACGATGAGCGCTACTTCATCTCC 48663 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| || | || ||||| |||| || || ||||| |||||||| || || | || Sbjct 48664 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 48723 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 ||| ||| | || ||||| | ||||| ||||| ||||||||||||||| Sbjct 48724 TTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATT 48783 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315 |||||| | ||| | || | ||||| || || |||| ||||| || | | Sbjct 48784 GAGAACATCCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGCT 48843 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 ||||| | | || ||||| || || ||||| || | || | || || ||||| Sbjct 48844 CAACGCACATAC---CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 48900 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| | |||||||| | ||| | | ||| | | ||| | | || || || Sbjct 48901 GACTGGGCAGTCAGGTGGATCCAAGACAAGGATTCTACCTTTGCCCAGCGTCTCGTTGCC 48960 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 ||||||||||| ||||| |||||||| || || || ||| |||| || ||||||||| Sbjct 48961 TTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCGTCCATTTTCTGGCTCAAG 49020 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 ||||| || |||||| | || ||||| | |||||| | || || || |||||||| Sbjct 49021 AAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGT 49080 Query 125556 CTACACTGTGACTTTGCC 125573 || ||| |||||| ||| Sbjct 49081 CTCCACACTGACTTCGCC 49098 >seq2931 Length=79620 Score = 141 bits (156), Expect = 1e-28 Identities = 323/481 (67%), Gaps = 4/481 (1%) Strand=Plus/Plus Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 |||||| || || ||||| || || || || ||| | ||| ||||| | || || ||| Sbjct 58343 TACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTCGAGCCATGG 58402 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 |||||||| || ||||| || | || || | || ||| || || || | || Sbjct 58403 CACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGAAAGGAGGAAGTCCGT 58462 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 ||| | |||||||| || || |||||| | || ||| | ||||||||||| || | | Sbjct 58463 GCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGAAG 58522 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 ||| |||||| ||| ||||||||| || | || || || | || | ||| Sbjct 58523 AACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGACGTTTACGGC 58582 Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGG-CCGATACGTGAGACGAGT 97165 || ||||| ||||| ||| | ||||||| | ||||| | || |||| | | Sbjct 58583 GATGAGTTCGAGGCTCTCTACGAGAGCTACGAGAAGGAGGGTAAGGGTCGCAAGACCA-T 58641 Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224 | | || | |||| || ||| | |||| | | ||||| ||||| |||| || | Sbjct 58642 CAAGGCTC-AGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACCGAGACAGGAAACCCTT 58700 Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284 ||| || ||||||||| | || ||||| |||||||| || | || |||||| Sbjct 58701 TCATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCC 58760 Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTT 97344 ||||||| || ||||| || ||||| |||||| | ||||| || ||| ||| || | Sbjct 58761 GCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTTCTCCAGATGAGGTGGCCGTGT 58820 Query 97345 G 97345 | Sbjct 58821 G 58821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741030243111760