Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2768 98.7 8e-16 >seq2768 Length=91863 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCG-CTCGTCCT 48575 ||| || ||||| ||||||||||| || |||||||| || || | ||| | | |||| Sbjct 13952 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTCCTCCCATCCT 14010 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 | ||||||||||| || | || ||||||||||| ||| || | || ||||| ||| Sbjct 14011 CGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCT 14070 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||| || ||||| | ||||| || | ||||| ||||| || ||||| | Sbjct 14071 GAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGAGTAATGGTCT 14130 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || || || || || || ||||||||||| Sbjct 14131 TTCCAGTCAGGGTCTTGACGAAAATCTGCAT 14161 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || ||||| || ||| |||||| ||||||||||| || | || || |||||||| Sbjct 14409 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCC 14468 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 | |||||| || | | || | |||||||| ||| || | || |||||||| | Sbjct 14469 AACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCTTGA 14528 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || ||| ||||| | |||||||||| || ||| ||||| || || || || Sbjct 14529 ATCTTCGACTTGACGTTGTCAATGGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTG 14588 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||| || |||||||||||||| Sbjct 14589 CCAGTAAGAGTCTTGACAAAAATCTGCAT 14617 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGT 48593 |||||| ||||||||||| |||| | | || || ||||||| |||||||| || || Sbjct 14654 CTCCTTCTGAATGTTGTAGTCAGAGAGAGTG-CGGCCGTCCTCAAGCTGCTTGCCCGCGA 14712 Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653 |||| | |||||||| || || | | ||||||||| || ||| ||| | | Sbjct 14713 AAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACAT 14772 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | ||||| |||| |||||| ||| | || ||||| || || ||||| || || | Sbjct 14773 TATCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGA 14832 Query 48714 CAAAAATCTGCAT 48726 | || |||||||| Sbjct 14833 CGAAGATCTGCAT 14845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421235151119126