Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq2768 98.7 8e-16
>seq2768
Length=91863
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCG-CTCGTCCT 48575
||| || ||||| ||||||||||| || |||||||| || || | ||| | | ||||
Sbjct 13952 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTCCTCCCATCCT 14010
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
| ||||||||||| || | || ||||||||||| ||| || | || ||||| |||
Sbjct 14011 CGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCT 14070
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
||| || ||||| | ||||| || | ||||| ||||| || ||||| |
Sbjct 14071 GAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGAGTAATGGTCT 14130
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| || || || || || || |||||||||||
Sbjct 14131 TTCCAGTCAGGGTCTTGACGAAAATCTGCAT 14161
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|| ||||| || ||| |||||| ||||||||||| || | || || ||||||||
Sbjct 14409 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCC 14468
Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637
| |||||| || | | || | |||||||| ||| || | || |||||||| |
Sbjct 14469 AACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCTTGA 14528
Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697
|| ||| ||||| | |||||||||| || ||| ||||| || || || ||
Sbjct 14529 ATCTTCGACTTGACGTTGTCAATGGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTG 14588
Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || ||||| || ||||||||||||||
Sbjct 14589 CCAGTAAGAGTCTTGACAAAAATCTGCAT 14617
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGT 48593
|||||| ||||||||||| |||| | | || || ||||||| |||||||| || ||
Sbjct 14654 CTCCTTCTGAATGTTGTAGTCAGAGAGAGTG-CGGCCGTCCTCAAGCTGCTTGCCCGCGA 14712
Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653
|||| | |||||||| || || | | ||||||||| || ||| ||| | |
Sbjct 14713 AAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACAT 14772
Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713
| ||||| |||| |||||| ||| | || ||||| || || ||||| || || |
Sbjct 14773 TATCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGA 14832
Query 48714 CAAAAATCTGCAT 48726
| || ||||||||
Sbjct 14833 CGAAGATCTGCAT 14845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421235151119126
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |