Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2931 181 1e-40 seq3078 131 2e-25 >seq2931 Length=79620 Score = 181 bits (200), Expect = 1e-40 Identities = 578/886 (65%), Gaps = 18/886 (2%) Strand=Plus/Minus Query 62883 ATGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 62940 ||||| || ||||| || |||| ||||| ||||| ||||||| | | | || | Sbjct 58850 ATGTTGGCAGGGCAAGTGACGCCAAGTTACACACGGCCACCTCATCTGGAGAAGAGTACT 58791 Query 62941 GTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCT 63000 | ||||| |||||||| || | ||| || || | || | || || |||| Sbjct 58790 CGACAATCTCTGTGCAAAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCT 58731 Query 63001 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 63060 | ||| || |||||||| || || ||||| || | || || || ||||||| || | Sbjct 58730 TGCGGTTGCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCGGTCTGAGACTCGA 58671 Query 63061 TAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--- 63116 ||| | | ||| | | || ||||||| || | ||| | |||| | || Sbjct 58670 GAATGGAGTACCAAA-GCTTCTGAGCCTTGATGGTC---TTGCGAC-CCTTACCCTCCTT 58616 Query 63117 -TCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 63173 ||||| | ||| | | | |||||||| || || |||| | |||||||||| Sbjct 58615 CTCGTAGCTCTCGTAGAGAGCC--TCGAACTCATCGCCGTAAACGTCTGCCAATCCAGGG 58558 Query 63174 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63233 ||||| | || ||||| | | ||| || |||| | || || || ||||| |||||| Sbjct 58557 CATTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGA 58498 Query 63234 TCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 63292 || || ||||| ||||| || || || || | || | |||||| ||||| || Sbjct 58497 TCCGGGATCCAGAGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTTTCCGTGGTT 58439 Query 63293 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63352 |||| | | || |||||| | | | ||| | ||||| || || | ||| ||||| | Sbjct 58438 CTTTCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAA 58379 Query 63353 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63412 | | ||||| || ||||| || || || || | ||| || || ||||| || | || | Sbjct 58378 AGCACCAGGGCGCTTGTTGCCACCTTGGTCAACGTACCTCGCAGTGTTGTTGAAGACGCG 58319 Query 63413 CAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGC 63472 | ||| |||| |||||||| || | || |||||||||| || || ||| |||| Sbjct 58318 GAGCATGGGAACGATACCGTTGGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGC 58259 Query 63473 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63532 ||| ||| | || | || || || || || | || ||||| | || ||| Sbjct 58258 ACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGT 58199 Query 63533 TTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63592 || | ||||| ||||||||||| || ||||| || |||||| | | || ||| Sbjct 58198 CTTGAGTGTGTCGTAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGA 58139 Query 63593 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 63652 || | ||| | || || ||||| || | || || |||||||| || || | Sbjct 58138 TGAGAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTA 58079 Query 63653 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 63712 ||| ||| | || ||||| ||||| || | || |||||| ||||| || Sbjct 58078 TTTGGAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCGATATCCTCGCCGTGAATGCC 58019 Query 63713 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63758 || || |||||||| | ||||||||| || || ||| | | |||| Sbjct 58018 CACCGCAACACGCATAATCATGTGCTGTGGCCTCTCAGCAACCTTG 57973 >seq3078 Length=65249 Score = 131 bits (144), Expect = 2e-25 Identities = 366/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| || ||| ||||||||||| | || || |||||||| || || || Sbjct 49100 CAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGG 49041 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || | ||| || |||||||| || ||||| || ||||| ||||| || || || |||||| Sbjct 49040 CCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATGGACGCGAAGGAGCCGGAGAAGAAG 48981 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33480 || || || || || || ||||||| || | || || | | | |||| || Sbjct 48980 ATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGG 48921 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 |||||| | ||||| ||||||||||| || | ||||| || || || |||||||| Sbjct 48920 ATCCACCTGACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 48861 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 ||||| || | || | || || | || || ||||| | || || | Sbjct 48860 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 48801 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 || | || ||||| ||||| || || || |||||||| || | || || | ||| Sbjct 48800 TCGGCGTGGATGTTCTCAATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATC 48741 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || || || | | || || || | || || || || ||||||||| || || Sbjct 48740 TGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCG 48681 Query 33721 AAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTGTTA-GTTTATTCCA 33776 || || || | || || || || || | ||||| | || | | || ||||| Sbjct 48680 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTC-GTTGAGACGGTTGTTCCA 48622 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 || | | || || || | || | || || ||||||| || || ||||||||||| Sbjct 48621 GTCGTGAAGGTCCTTGGAGAGGTCAATCTCCTCTGCTGTCCAGAAAGACGCCTCTGCCTT 48562 Query 33837 TTTATACATGTTCCAGAT 33854 |||||||| | |||||| Sbjct 48561 CTTATACATCTGCCAGAT 48544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622922858338160