Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2768 107 2e-18 seq2808 95.1 1e-14 >seq2768 Length=91863 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||| ||||||||||| || ||||||||||| | || ||| | ||||| Sbjct 14406 AGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCC 14465 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || ||||| ||| | || || ||||| |||||| || | ||||| ||||| Sbjct 14466 TCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCT 14525 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | ||| || | | | | || ||| | ||| || | || || || Sbjct 14526 TGAATCTTCGACTTGACGTTGTCAATGGTATCGGATGATTCCACCTCGAGCGTAATCGTC 14585 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || ||||||||||||||||| Sbjct 14586 TTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 14617 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || ||||||||||| | | || | ||||| Sbjct 14634 AGGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCGTCC 14693 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || |||||||| |||| || ||||| ||||| ||| | |||||| ||||| Sbjct 14694 TCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 14753 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | |||||| | |||| |||| |||||||| Sbjct 14754 TGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTC 14813 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || ||||| || |||||||| Sbjct 14814 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 14845 >seq2808 Length=116519 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || ||||| |||| || || ||||||||||| || ||||||||||| | Sbjct 80921 CCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 80862 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || ||||| || | || || ||||| |||||| || Sbjct 80861 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 80802 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | ||| || | | | | ||||||| | |||| Sbjct 80801 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACC 80742 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || || || ||||| || || || || || ||||| Sbjct 80741 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 80695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405072566906740