Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq3078 131 2e-25
>seq3078
Length=65249
Score = 131 bits (144), Expect = 2e-25
Identities = 366/558 (66%), Gaps = 8/558 (1%)
Strand=Plus/Minus
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| ||||| || ||| ||||||||||| | || | |||||||| || || ||
Sbjct 49100 CAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGG 49041
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|| | ||| || |||||||| || ||||| || |||||||| || || || || |||||
Sbjct 49040 CCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATGGACGCGAAGGAGCCGGAGAAGAAG 48981
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 32837
|| || || || || || ||||||| || | || || | | | |||| ||
Sbjct 48980 ATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGG 48921
Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897
|||||| | ||||| ||||||||||| || | ||||| || ||||| || |||||
Sbjct 48920 ATCCACCTGACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 48861
Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957
||||| || | || | || || | ||||| || || | || || |
Sbjct 48860 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 48801
Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017
|| | || ||||| ||||| ||||| || ||||||||||| | || || | |||
Sbjct 48800 TCGGCGTGGATGTTCTCAATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATC 48741
Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077
|| || || | | || || || | || || || || ||||||||| || ||
Sbjct 48740 TGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCG 48681
Query 33078 AAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTGTTA-GTTTATTCCA 33133
|| || || | || || || || || | ||||| | || | | || |||||
Sbjct 48680 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTC-GTTGAGACGGTTGTTCCA 48622
Query 33134 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33193
|| | | || || || | || | || || ||||||| || || |||||||||||
Sbjct 48621 GTCGTGAAGGTCCTTGGAGAGGTCAATCTCCTCTGCTGTCCAGAAAGACGCCTCTGCCTT 48562
Query 33194 TTTATACATATTCCAGAT 33211
|||||||| | ||||||
Sbjct 48561 CTTATACATCTGCCAGAT 48544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633607240829600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |