Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3078 131 2e-25 >seq3078 Length=65249 Score = 131 bits (144), Expect = 2e-25 Identities = 366/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| || ||| ||||||||||| | || | |||||||| || || || Sbjct 49100 CAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGG 49041 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || | ||| || |||||||| || ||||| || |||||||| || || || || ||||| Sbjct 49040 CCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATGGACGCGAAGGAGCCGGAGAAGAAG 48981 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 32837 || || || || || || ||||||| || | || || | | | |||| || Sbjct 48980 ATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGG 48921 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 |||||| | ||||| ||||||||||| || | ||||| || ||||| || ||||| Sbjct 48920 ATCCACCTGACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 48861 Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957 ||||| || | || | || || | ||||| || || | || || | Sbjct 48860 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 48801 Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017 || | || ||||| ||||| ||||| || ||||||||||| | || || | ||| Sbjct 48800 TCGGCGTGGATGTTCTCAATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATC 48741 Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077 || || || | | || || || | || || || || ||||||||| || || Sbjct 48740 TGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCG 48681 Query 33078 AAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTGTTA-GTTTATTCCA 33133 || || || | || || || || || | ||||| | || | | || ||||| Sbjct 48680 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTC-GTTGAGACGGTTGTTCCA 48622 Query 33134 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33193 || | | || || || | || | || || ||||||| || || ||||||||||| Sbjct 48621 GTCGTGAAGGTCCTTGGAGAGGTCAATCTCCTCTGCTGTCCAGAAAGACGCCTCTGCCTT 48562 Query 33194 TTTATACATATTCCAGAT 33211 |||||||| | |||||| Sbjct 48561 CTTATACATCTGCCAGAT 48544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633607240829600