Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2768 154 1e-32 seq2808 114 1e-20 seq2512 102 7e-17 >seq2768 Length=91863 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || ||| | || || || ||| | || || || |||||| | || Sbjct 14617 ATGCAGATTTTTGTCAAGACTCTTACTGGCAAGACGATTACGCTCGAGGTGGAATCATCC 14558 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || ||||||||||||||||||||||| || || || Sbjct 14557 GATACCATTGACAACGTCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCCCCGGACCAG 14498 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||||| ||||| ||||||| | || || |||||| Sbjct 14497 CAGCGCCTGATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAAC 14438 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || |||||| | ||||| ||| | || | || || ||| Sbjct 14437 ATTCAGAAGGAGTCCACCCTGCATTTGGTTCTCCGCCTTCGTGGTGGT 14390 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || || |||||||| | ||| | | || Sbjct 15049 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAACGTTAAGAGC 14990 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || |||||||||||||| ||||| || || || |||||||| || || |||||||| Sbjct 14989 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 14930 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| ||||||| ||||||| |||||||| || || || || ||| | || Sbjct 14929 CAGCTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 14870 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || || | || |||| || ||| Sbjct 14869 TTGGTCCTCCGTCTGCGTGGTGGT 14846 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | ||||| || || | || || ||||| || | | Sbjct 14389 ATGCAAATCTTCGTCAAGACCCTCACCGGAAAGACAATTACCCTGGAAGTCGAGTCGTCG 14330 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | |||| || || ||||| |||||||| || ||||| || || Sbjct 14329 GATACGATCGACAACGTCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCAG 14270 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | |||||| ||| ||| | || ||||||||| Sbjct 14269 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGTCTGATTACAAC 14210 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| ||||| | ||| | || | || || ||| Sbjct 14209 ATCCAGAAGGAGTCCACATTACATCTTGTTCTCCGCCTCCGTGGTGGT 14162 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || ||||| | || ||||| | || Sbjct 14845 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTGGAGTCATCC 14786 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || || ||||||||||| ||||| || || || Sbjct 14785 GACACCATCGATAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 14726 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | ||||| |||||| |||| || |||||| Sbjct 14725 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGACTACAAC 14666 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 14665 ATTCAGAAGGAGTCGAC 14649 >seq2808 Length=116519 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || || |||| ||||| ||||| | || Sbjct 80695 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 80754 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| ||||| || || || Sbjct 80755 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 80814 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| ||||||| | || || |||||| Sbjct 80815 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 80874 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | || || || || || | || |||||| Sbjct 80875 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTCCGTGGAGGT 80922 >seq2512 Length=28997 Score = 102 bits (112), Expect = 7e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287 || || || || || || || || || |||| ||||| || || || ||||||| | Sbjct 21047 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 21106 Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 ||| || |||| || || || ||||||||||| ||||| || || || ||||| || Sbjct 21107 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAACGCCTG 21166 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || || ||||| ||| | |||||| |||||| | ||||| |||||||| || || Sbjct 21167 ATCTTCGCTGGCAAGCAGCTTGAGGATGGACGCACCCTTTCCGACTACAACATCCAGAA 21225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419712009150190