Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2768 176 8e-39 seq2512 125 1e-23 seq3078 102 2e-16 seq2589 89.7 9e-13 >seq2768 Length=91863 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || ||||| || || ||||| || || ||| Sbjct 14619 CCACCACGAAGACGAAGGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAG 14678 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || || | || ||||| || ||| Sbjct 14679 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 14738 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||| || ||||||||||| | ||| || || Sbjct 14739 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACC 14798 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct 14799 TCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 14845 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | |||| |||||||| || |||||||| ||||| || Sbjct 14163 CCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGAC 14222 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| ||||| Sbjct 14223 AGGGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 14282 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| ||||| ||||| | ||||||| ||||| || || | || || ||| Sbjct 14283 ATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTGTCGATCGTATCCGACGACTCGACT 14342 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||| || || ||||| ||||||||||||||||| || ||||| Sbjct 14343 TCCAGGGTAATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 14389 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || ||| ||| || |||||||| || ||| Sbjct 13935 CCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 13994 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||||||||| || | |||||| || ||||| || | | || ||||| ||||| Sbjct 13995 AGCGTCCTCCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGTGGG 14054 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| | ||||||| || |||||||| | || || || Sbjct 14055 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGACTCAACC 14114 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| ||||| || |||||||||||||| |||||||| Sbjct 14115 TCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 14161 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | ||||| || || |||||||| || || ||||| || || || Sbjct 14391 CCACCACGAAGGCGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAC 14450 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || |||||||| || || || || || | || ||||| || ||| Sbjct 14451 AGGGTGCGGCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGA 14510 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| | ||||||| || ||||| || | |||||| || Sbjct 14511 ATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTATCGGATGATTCCACC 14570 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || || || || || || |||||||| || |||||||| Sbjct 14571 TCGAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 14617 Score = 132 bits (146), Expect = 9e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || ||||| || |||||||| || |||||| Sbjct 14847 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 14906 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | ||| ||||| || ||| Sbjct 14907 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 14966 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| ||| ||| |||||||| || | || || || Sbjct 14967 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACGTTGTCGATGGTATCGGAGGACTCGACC 15026 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||||||||| || || || Sbjct 15027 TCAAGGGTGATGGTCTTGCCAGT 15049 >seq2512 Length=28997 Score = 125 bits (138), Expect = 1e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| || ||||| || Sbjct 21225 TTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCAAGCTGCTTGCCAGCGAAGATC 21166 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | ||| ||||| || ||||| || |||||||| || ||||| | |||||| ||| Sbjct 21165 AGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 21106 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | || || || || | ||||||||| || ||||| | |||||||||||| Sbjct 21105 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 21047 >seq3078 Length=65249 Score = 102 bits (112), Expect = 2e-16 Identities = 313/478 (65%), Gaps = 22/478 (5%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || | ||| ||||| || | || || |||||||||||||| ||| || | Sbjct 49404 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCTGC 49345 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTC-TCGGCGCCAAACTGCTTGGGGTAAC 10053 ||||| ||| |||||||||||| || ||||| ||| | | | ||| || | Sbjct 49344 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGACTTGTAG-TACTTCTCGTTGC 49286 Query 10054 CGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGT 10113 |||| | | | | ||| || |||||||| ||||| || |||||| || | || Sbjct 49285 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 49226 Query 10114 TCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 ||||||| | || | ||||| | || || | ||| |||| ||| ||| ||| | Sbjct 49225 TCATGCCGAGCAGGGCACAGGGAAGAGCCTCTGTCAAGAACTCCTGCTCGATGGTGACAG 49166 Query 10174 CTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCT-TCGAAT-- 10230 | |||| |||| || | | | || | ||||| | | | | || || Sbjct 49165 C---CTCGGTGATG------ACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGT 49115 Query 10231 ------ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGT 10284 | ||||| | || | |||||| |||||||||||| ||||| ||||| Sbjct 49114 GGGAGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAGATGAGCTCGT 49055 Query 10285 TGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGG-CGCAGAAC 10343 |||| || ||| || | |||||| || || || ||||||||||||| ||| ||| Sbjct 49054 TGGAGAAGGTCAGGCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATGGACGC-GAAG 48996 Query 10344 GACCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 || |||||||| | | |||||| ||| | |||| ||||| |||| || |||| Sbjct 48995 GAGCCGGAGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGGGCAAAGG 48938 >seq2589 Length=370448 Score = 89.7 bits (98), Expect = 9e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAG 225495 ||| ||| | || |||||||| ||||||||||| || || | ||| | | | || | Sbjct 193723 GCAGACTTCATCGAGGAAGCCGGAGTCGTGGGAAACGATCAGGGAGGTGATCTCGGTGTG 193664 Query 225496 GCCCTTGAGGTG--CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGT 225553 | |||||||| | || |||||| |||||| || |||| ||| || |||||| Sbjct 193663 GGTCTTGAGGTAATCCTG--GAGCCACTTGACGTTGGCAACATCCAAGTGATTAGTAGGT 193606 Query 225554 TCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATT 225613 ||||| ||||| || | ||||| | || | || || | | |||| |||||||| Sbjct 193605 TCGTCAAGAAGGAGAACATCAGCCTTCATCAACATAGCTCTGGCAAGAGCAAGCTTCATC 193546 Query 225614 TTCCAGCCCCCGGACAGGGAGCCGA 225638 ||||| || ||||| || ||||||| Sbjct 193545 TTCCATCCACCGGAGAGCGAGCCGA 193521 Score = 87.8 bits (96), Expect = 3e-12 Identities = 130/182 (71%), Gaps = 8/182 (4%) Strand=Plus/Minus Query 224974 GGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTG 225033 ||| || |||||||||| |||||||||||||||| | || || || |||||| || | Sbjct 194188 GGCGTAACGCCACTGGAGGTACTGGTTGGGGGTCTTCTCGAGATGCATCTCAACGTGCTC 194129 Query 225034 GAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCG 225093 | || ||||| | ||| | || |||| |||||| |||||| ||| ||| Sbjct 194128 AAGGGCGTGCTGCTTGATGTATCCAATACGCAAGTTGGGGTGCTTCTCAACACGGCC--- 194072 Query 225094 AGTCGGTTG----TGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCAT 225149 ||| ||||| | |||||| || |||| ||||||||| || | ||| || ||||| | Sbjct 194071 AGT-GGTTGGGATGGTCTCGCCAGTCAGGAGCTTGATGAGAGTGGACTTTCCGGCACCGT 194013 Query 225150 TG 225151 || Sbjct 194012 TG 194011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921586387604720