Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2808 118 3e-21 seq2768 118 3e-21 seq2512 104 6e-17 seq3078 95.1 3e-14 >seq2808 Length=116519 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || |||||||| || || | |||| ||| || || ||||| || ||||| | Sbjct 80921 CCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 80862 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||||||||| ||||| || || ||| Sbjct 80861 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG---GTCCGGG 80805 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || |||||||| || | || || || || |||| ||| ||| || Sbjct 80804 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCC 80745 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 80744 ACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 80695 >seq2768 Length=91863 Score = 118 bits (130), Expect = 3e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | || || | |||| ||||| || || ||||| || |||||| Sbjct 13932 TGGCCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 13991 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 ||||| | || || || | || || || |||||||||| |||||| || | Sbjct 13992 CTCAGCGTCCTCCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGT 14051 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || |||||||| || || | || ||||| || || | || ||| || Sbjct 14052 GGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGACTCA 14111 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| || ||||| ||||||||||| |||||||| Sbjct 14112 ACCTCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 14161 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | ||| | ||| || || || || || ||||| | Sbjct 14391 CCACCACGAAGGCGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAC 14450 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || || || || || || |||||||| ||||| || || ||| Sbjct 14451 AGGGTGCGGCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGG---TCCGGG 14507 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || || || |||| || ||||| || || | |||| ||||| Sbjct 14508 GGAATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTATCGGATGATTCC 14567 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| |||||||| || || ||||||||||| || |||||||| Sbjct 14568 ACCTCGAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 14617 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||| | ||| || || ||||| || || || | Sbjct 14163 CCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGAC 14222 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || ||||| ||||| ||||| || |||| Sbjct 14223 AGGGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 14282 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||| ||||| || | || ||||| || || | ||| ||| || ||| Sbjct 14283 ATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTGTCGATCGTATCCGACGACTCGACT 14342 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || ||||||||||| || ||||| Sbjct 14343 TCCAGGGTAATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 14389 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| | ||| ||||| ||||| || | || || || ||||| Sbjct 14655 TCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAA 14714 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || | || || || || || |||||||| |||| ||||| || Sbjct 14715 ATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTA 14774 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || || | ||||| ||||| || || || ||||||||| Sbjct 14775 TCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACG 14834 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 14835 AAGATCTGCAT 14845 Score = 89.7 bits (98), Expect = 1e-12 Identities = 126/173 (73%), Gaps = 8/173 (5%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| ||||| || | || || || |||||| Sbjct 14883 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 14942 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCAC 288398 |||||||| || || || ||| ||||| || || || ||||| || ||| || || Sbjct 14943 ATCAGACGTTGCTG---GTCCGGGGGAATTCCCTCCTTGTCTTGGATCTT-GCTCTTAAC 14998 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCA 288451 ||| || || | |||| || || || || || ||||| ||||| || |||| Sbjct 14999 GTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 15051 >seq2512 Length=28997 Score = 104 bits (114), Expect = 6e-17 Identities = 133/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| || |||||||| || || | || || || ||||||||| Sbjct 21225 TTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCAAGCTGCTTGCCAGCGAAGATC 21166 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || || || || ||| ||||| || || |||||||| |||| || || || Sbjct 21165 AGGCGTTGCTGG---TCCGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTG 21109 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| |||| || || || || || ||||| ||||| || |||| ||||||||| Sbjct 21108 TCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACG 21049 Query 288463 AA 288464 || Sbjct 21048 AA 21047 >seq3078 Length=65249 Score = 95.1 bits (104), Expect = 3e-14 Identities = 169/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 269098 GAAGCAGTTACAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGT 269157 || || || || | ||| | |||||| | || ||| | || ||| | || |||| Sbjct 49162 GAGGCTGTCACCATCGAGCAGGAGTTCTTGACAGAGGCTCTTCCCTGTGCCCTGCTCGGC 49221 Query 269158 ATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTAT-CTTCACGGC 269216 ||||| ||| | | ||||| ||||| || || ||||| || || | | || | | | Sbjct 49222 ATGAACGCCAACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCC 49281 Query 269217 ACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTC 269276 ||||| | ||||| ||||| |||| || || |||| ||| ||||| || || Sbjct 49282 -CTCGGCAACGAGAAGTACTACAAGTCGACCAACCCATTCGACTTCATGGAGAACATCTC 49340 Query 269277 GCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGT 269336 || | ||||||||| ||||||||||| ||||||||| |||||| ||| ||||||| Sbjct 49341 CCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCCGACTACCAAAAGACTGGTGT 49400 Query 269337 AATG 269340 ||| Sbjct 49401 CATG 49404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179607152629428