Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2768 113 5e-20 seq2808 105 7e-18 seq2512 89.7 5e-13 >seq2768 Length=91863 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || ||||||||||| || | || ||||| |||| |||||||||||||| Sbjct 14649 GTCGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCC 14708 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| || ||||||||||| |||||||| || || || || || || || ||| Sbjct 14709 GCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTC 14768 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | ||||| || | ||| | ||||||||| || | || Sbjct 14769 ACATTATCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTC 14828 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 14829 TTGACGAAGATCTGCAT 14845 Score = 100 bits (110), Expect = 3e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || |||||| |||| ||||||||||||||| Sbjct 14877 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCG 14936 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || || |||||||| || |||||||| || || ||||| || || ||| Sbjct 14937 GCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGCTCTTA 14996 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCA 64421 || || | ||||| || || || || | || | ||||||||| |||| Sbjct 14997 ACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 15051 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || ||||||||||| || | | |||||| |||| || | ||||||||| Sbjct 14421 GTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAACTGCTTGCCA 14480 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || ||||||||||| || ||||| || || || ||||| || || ||| Sbjct 14481 GCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCTTGAATCTTCGACTTG 14540 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||| | ||||| || | || | |||||||| || | ||| Sbjct 14541 ACGTTGTCAATGGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTGCCAGTAAGAGTC 14600 Query 64427 TTTACGAAAATTTGCAT 64443 || || ||||| ||||| Sbjct 14601 TTGACAAAAATCTGCAT 14617 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || || || ||||||||||| | | ||| || | || Sbjct 14178 AGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCC 14237 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || |||| || ||||||||||| || || || || || || ||| Sbjct 14238 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 14297 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409 || || || ||| || || | |||| ||| || || ||||| | || | | Sbjct 14298 TGGATCTTAGACTTGACGTTGTCGATCGTAT--CCGACGACTCGACTTCCAGGGTAATTG 14355 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| ||||| | || || ||||| |||||||| Sbjct 14356 TCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 14389 >seq2808 Length=116519 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| || || | |||| || || || || || |||||||| || | Sbjct 80922 ACCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 80863 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || |||||||||||||| | || || ||||||||||| || || Sbjct 80862 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 80803 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||| || || || || || || ||| ||| || | || || | ||||| Sbjct 80802 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCAC 80743 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| |||| || || ||||| |||||||| Sbjct 80742 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 80695 >seq2512 Length=28997 Score = 89.7 bits (98), Expect = 5e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || || |||||||| || | | |||||| | || |||||||||||||| || | || Sbjct 21225 TTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCAAGCTGCTTGCCAGCGAAGATC 21166 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || || |||||||| || |||||||| || || || || || || ||| ||| || Sbjct 21165 AGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 21106 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 | ||||| || || || || | || | ||||||||| ||||| || || ||||| Sbjct 21105 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 21047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499625276379440