Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2768 125 7e-24 seq3078 107 2e-18 seq2808 95.1 1e-14 >seq2768 Length=91863 Score = 125 bits (138), Expect = 7e-24 Identities = 157/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| ||||| | | | |||||||| |||||||||||||| || || || |||||| Sbjct 14408 AACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTC 14467 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | || || || | | |||| || ||||| |||||||| || ||||| || ||||| | Sbjct 14468 CAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTC-TT 14526 Query 138525 GATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 || | || | || | ||| || | ||| |||| || |||||||||| ||| | ||| Sbjct 14527 GAATCTTCGACTTGACGTTG-TCAATGGTATCGGATGATTCCACCTCGAGCGTAATCGTC 14585 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| ||||| || |||||||||||||| Sbjct 14586 TTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 14617 Score = 114 bits (126), Expect = 1e-20 Identities = 144/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || | | |||||||| || ||||| | | Sbjct 13970 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTACCAGCGAA 14029 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| | |||||| |||||||| || ||||| || || || ||| | || | || | | Sbjct 14030 GATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATC-CTGAATCTTGGACTTGACGT 14088 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||| | |||||| ||||||| || | || || |||||||| || || Sbjct 14089 TG-TCAATGGTGTCCGACGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTG 14147 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 14148 ACGAAAATCTGCAT 14161 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| | ||| || |||||| || || || || | Sbjct 14652 GACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCCGCG 14711 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || || ||||| ||||| ||||| || || || ||||| ||| || || | Sbjct 14712 AAAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACA 14771 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||||| | || | || || || || || || || Sbjct 14772 TTATCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTG 14831 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 14832 ACGAAGATCTGCAT 14845 >seq3078 Length=65249 Score = 107 bits (118), Expect = 2e-18 Identities = 490/760 (64%), Gaps = 19/760 (3%) Strand=Plus/Plus Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145 ||||| || |||||||| || ||| ||||| | || ||||||||||| | || | Sbjct 48637 AACGACGATGAGCGCTACTTCATCTCCCACGTTCTCGCTTTCTTCGCCGCGTCTGACGGA 48696 Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCA 52204 || || ||| |||||| ||||| | | |||| | | ||| || | | || || | Sbjct 48697 ATTGTCAACGAGAACCTCCTCGAGCGCTT-CAGCAGCGAGGTCCAGATCCCAGAAGCCCG 48755 Query 52205 ATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCT 52264 | ||| || ||| ||| | | || ||| | | ||| | |||| ||| || || Sbjct 48756 CTGCTTCTACGGTTTCCAAATCATGATTGAGAACATCCACGCCGAGACATACTCCCTCCT 48815 Query 52265 CATTGAGCAGCTG-ATAAAAGATGAGCACGAGCGCG-ACACGCTGCTGAATGCGTTCGAG 52322 ||| || || | || || || || | ||| | || || | ||||| ||||| Sbjct 48816 CATCGA-CACATACATCAAGGAGCAGGCTCAACGCACATAC-CTCTTCAATGCCATCGAG 48873 Query 52323 CACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACC 52382 | | || ||| | || ||||| | |||||| | | ||||||| | |||| Sbjct 48874 ACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCAGTCAGGTGGATCCAA---GACAAG 48930 Query 52383 G---CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCC 52439 | | || | ||| |||| | || ||||||||| || ||||| | || || ||| Sbjct 48931 GATTCTACCTTTGCCCAGCGTCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCC 48990 Query 52440 GGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTC 52499 ||| ||| || |||| || | | || | | || | ||| | |||||||| ||| Sbjct 48991 GGCTCCTTCGCGTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTC 49050 Query 52500 AGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTAC 52559 ||||||| | || || |||||||| || || ||||| ||||| || |||||| || | Sbjct 49051 TCCAACGAGCTCATCTCCCGCGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTC 49110 Query 52560 AAG-ACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGC 52618 || | |||| || | | | | | || | || | | ||| ||||| Sbjct 49111 TCCCACCTTAGACACCGCCCAA--GCAAGCAGGC-CGTCCAAGA-CGTCATCACCGAGGC 49166 Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678 || | ||||| ||||||| || || | || || || | ||||| |||||||| Sbjct 49167 TGTCACCATCGAGCAGGAGTTCTTGACAGAGGCTCTTCCCTGTGCCCTGCTCGGCATGAA 49226 Query 52679 CGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738 ||| | | ||| | ||||| ||||| || || || | ||| || | ||| | Sbjct 49227 CGCCAACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCCCTC-G 49285 Query 52739 GCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797 ||| | | ||||||| ||| | ||| || || || || ||| | ||||| || || | Sbjct 49286 GCAACGAGAAGTACTACAAGTCGACCAACCCATTCGACTTCATGGAGAACATCTCCCTGG 49345 Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || ||||||||||| ||||||||||| |||| ||| || Sbjct 49346 CAGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCCGACTA 49385 >seq2808 Length=116519 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||||||| || || |||| Sbjct 80888 GACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCG 80829 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| |||||||| || || || || ||||| ||| || || | | Sbjct 80828 AAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACA 80769 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||||| |||||||||||| | || | || || || ||||| || || Sbjct 80768 TTG-TCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTT 80710 Query 138600 TACAAAAATCTGCATGGCT 138618 || || || |||||| || Sbjct 80709 CACGAAGATTTGCATGACT 80691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496243008546720